Binding MOAD, a high-quality protein-ligand database. - Mark L. Benson; Richard D. Smith; Nickolay A. Khazanov; Brandon Dimcheff; John E. Beaver; Peter Dresslar; Jason Nerothin; Heather A. Carlson (Nucleic Acids Res., 2008)

Prediction of trypsin/molecular fragment binding affinities by free energy decomposition and empirical scores. - Mark L. Benson; John C. Faver; Melek N. Ucisik; Danial S. Dashti; Zheng Zheng 002; Kenneth M. Merz Jr. (J. Comput. Aided Mol. Des., 2012)

Inherent versus induced protein flexibility: Comparisons within and between apo and holo structures. - Jordan J. Clark; Mark L. Benson; Richard D. Smith; Heather A. Carlson (PLoS Comput. Biol., 2019)