Heuristic Search for 2D NMR Alignment to Support Metabolite Identification. - Geun-Cheol Lee; Jeff de Ropp; Mark R. Viant; David L. Woodruff; Ping Yu 009 (ESCAPE, 2007)

Improved classification accuracy in 1- and 2-dimensional NMR metabolomics data using the variance stabilising generalised logarithm transformation. - Helen M. Parsons; Christian Ludwig; Ulrich L. Günther; Mark R. Viant (BMC Bioinform., 2007)

Variance stabilising transformations for NMR metabolomics data. - Helen M. Parsons; Mark R. Viant (BMC Syst. Biol., 2007)

Linked Metabolites: A tool for the construction of directed metabolic graphs. - John M. Easton; Lisa M. Harris; Mark R. Viant; Andrew Peet; Theodoros N. Arvanitis (Comput. Biol. Medicine, 2010)

Towards a System Level Understanding of Non-Model Organisms Sampled from the Environment: A Network Biology Approach. - Tim D. Williams; Nil Turan; Amer M. Diab; Huifeng Wu; Carolynn Mackenzie; Katie L. Bartie; Olga Hrydziuszko; Brett P. Lyons; Grant D. Stentiford; John M. Herbert; Joseph K. Abraham; Ioanna Katsiadaki; et al. (PLoS Comput. Biol., 2011)

MaConDa: a publicly accessible mass spectrometry contaminants database. - Ralf J. M. Weber; Eva Li; Jonathan Bruty; Shan He 001; Mark R. Viant (Bioinform., 2012)

HAMMER: automated operation of mass frontier to construct in silico mass spectral fragmentation libraries. - Jiarui Zhou; Ralf J. M. Weber; James William Allwood; Robert Mistrik; Zexuan Zhu; Zhen Ji; Siping Chen; Warwick B. Dunn; Shan He 001; Mark R. Viant (Bioinform., 2014)

MUSCLE: automated multi-objective evolutionary optimization of targeted LC-MS/MS analysis. - James Bradbury 001; Grégory Genta-Jouve; James William Allwood; Warwick B. Dunn; Royston Goodacre; Joshua D. Knowles; Shan He 001; Mark R. Viant (Bioinform., 2015)

Robust twin boosting for feature selection from high-dimensional omics data with label noise. - Shan He 001; Huanhuan Chen; Zexuan Zhu; Douglas G. Ward; Helen J. Cooper; Mark R. Viant; John K. Heath; Xin Yao 001 (Inf. Sci., 2015)

mzML2ISA & nmrML2ISA: generating enriched ISA-Tab metadata files from metabolomics XML data. - Martin Larralde; Thomas N. Lawson; Ralf J. M. Weber; Pablo A. Moreno; Kenneth Haug; Philippe Rocca-Serra; Mark R. Viant; Christoph Steinbeck; Reza M. Salek (Bioinform., 2017)

The future of metabolomics in ELIXIR. - Merlijn N. van Rijswijk; Charlie Beirnaert; Christophe Caron; Marta Cascante; Victoria Dominguez Del Angel; Warwick B. Dunn; Timothy M. D. Ebbels; Franck Giacomoni; Alejandra N. González-Beltrán; Thomas Hankemeier; Kenneth Haug; Jose L. Izquierdo-García; et al. (F1000Research, 2017)