Multi-lens, Multi-camera Calibration of Sony Alpha NEX 5 Digital Cameras. - Mark Shortis (GSR, 2012)

An Application of Shape-Based Level Sets to Fish Detection in Underwater Images. - Mehdi Ravanbakhsh; Mark Shortis; Faisal Shaifat; Ajmal S. Mian; Euan Harvey; James Seager (GSR, 2014)

Progress Toward Automation of Salmon Escapement Counts. - Mark Shortis; Ted Otis (GSR, 2014)

Towards fully automatic reliable 3D acquisition: From designing imaging network to a complete and accurate point cloud. - Ali Hosseininaveh; Ben Sargeant; Tohid Erfani; Stuart Robson; Mark Shortis; Mona Hess; Jan Boehm 001 (Robotics Auton. Syst., 2014)

Calibration Techniques for Accurate Measurements by Underwater Camera Systems. - Mark Shortis (Sensors, 2015)

Fish detection and species classification in underwater environments using deep learning with temporal information. - Ahsan Jalal; Ahmad Salman; Ajmal Mian; Mark Shortis; Faisal Shafait (Ecol. Informatics, 2020)