Lattice models of peptide aggregation: Evaluation of conformational search algorithms. - Mark T. Oakley; Jonathan M. Garibaldi; Jonathan D. Hirst (J. Comput. Chem., 2005)

Protein Structure Optimization with a "Lamarckian"' Ant Colony Algorithm. - Mark T. Oakley; E. Grace Richardson; Harriet Carr; Roy L. Johnston (IEEE ACM Trans. Comput. Biol. Bioinform., 2013)

Visualizing energy landscapes with metric disconnectivity graphs. - Lewis C. Smeeton; Mark T. Oakley; Roy L. Johnston (J. Comput. Chem., 2014)