Structural Alignment of Two RNA Sequences with Lagrangian Relaxation. - Markus Bauer 001; Gunnar W. Klau (ISAAC, 2004)

Fast and Accurate Structural RNA Alignment by Progressive Lagrangian Optimization. - Markus Bauer 001; Gunnar W. Klau; Knut Reinert (CompLife, 2005)

Multiple Structural RNA Alignment with Lagrangian Relaxation. - Markus Bauer 001; Gunnar W. Klau; Knut Reinert (WABI, 2005)

Accelerated microRNA-Precursor Detection Using the Smith-Waterman Algorithm on FPGAs. - Patrick May; Gunnar W. Klau; Markus Bauer 001; Thomas Steinke 001 (GCCB, 2006)

A General Paradigm for Fast, Adaptive Clustering of Biological Sequences. - Knut Reinert; Markus Bauer 001; Andreas Döring 001; Gunnar W. Klau; Aaron L. Halpern (German Conference on Bioinformatics, 2007)

Accurate multiple sequence-structure alignment of RNA sequences using combinatorial optimization. - Markus Bauer 001; Gunnar W. Klau; Knut Reinert (BMC Bioinform., 2007)

An Exact Mathematical Programming Approach to Multiple RNA Sequence-Structure Alignment. - Markus Bauer 001; Gunnar W. Klau; Knut Reinert (Algorithmic Oper. Res., 2008)

A combinatorial approach to RNA sequence-structure alignments. - Markus Bauer 001 (2008)

CLEVER: clique-enumerating variant finder. - Tobias Marschall; Ivan G. Costa; Stefan Canzar; Markus Bauer 001; Gunnar W. Klau; Alexander Schliep; Alexander Schönhuth (Bioinform., 2012)