A Combinatorial Approach to Reconstruct Petri Nets from Experimental Data. - Markus Durzinsky; Annegret Wagler; Robert Weismantel (CMSB, 2008)

Automatic reconstruction of molecular and genetic networks from discrete time series data. - Markus Durzinsky; Annegret Wagler; Robert Weismantel; Wolfgang Marwan (Biosyst., 2008)

Reconstruction of extended Petri nets from time series data and its application to signal transduction and to gene regulatory networks. - Markus Durzinsky; Annegret Wagler; Wolfgang Marwan (BMC Syst. Biol., 2011)

An algorithmic framework for network reconstruction. - Markus Durzinsky; Annegret Wagler; Robert Weismantel (Theor. Comput. Sci., 2011)

Automatic network reconstruction using ASP. - Markus Durzinsky; Wolfgang Marwan; Max Ostrowski; Torsten Schaub; Annegret Wagler (Theory Pract. Log. Program., 2011)