Algorithms for group actions applied to graph generation. - Thomas Grüner; Reinhard Laue; Markus Meringer (Groups and Computation, 1995)

Fast generation of regular graphs and construction of cages. - Markus Meringer (J. Graph Theory, 1999)

Constrained Generation of Molecular Graphs. - Reinhard Laue; Thomas Grüner; Markus Meringer; Adalbert Kerber (Graphs and Discovery, 2001)

Exploring the Limits of Graph Invariant- and Spectrum-Based Discrimination of (Sub)structures. - Christoph Rücker; Gerta Rücker; Markus Meringer (J. Chem. Inf. Comput. Sci., 2002)

MOLGEN-CID - A Canonizer for Molecules and Graphs Accessible through the Internet. - Joachim Braun; Ralf Gugisch; Adalbert Kerber; Reinhard Laue; Markus Meringer; Christoph Rücker (J. Chem. Inf. Model., 2004)

QSPR Using MOLGEN-QSPR: The Example of Haloalkane Boiling Points. - Christoph Rücker; Markus Meringer; Adalbert Kerber (J. Chem. Inf. Model., 2004)

QSPR Using MOLGEN-QSPR: The Challenge of Fluoroalkane Boiling Points. - Christoph Rücker; Markus Meringer; Adalbert Kerber (J. Chem. Inf. Model., 2005)

Molecules in Silico: A Graph Description of Chemical Reactions. - Adalbert Kerber; Reinhard Laue; Markus Meringer; Christoph Rücker (J. Chem. Inf. Model., 2007)

y-Randomization and Its Variants in QSPR/QSAR. - Christoph Rücker; Gerta Rücker; Markus Meringer (J. Chem. Inf. Model., 2007)

Nine years of atmospheric remote sensing with sciamachy - atmospheric parameters and data products. - Gunter Lichtenberg; Manfred Gottwald; Adrian Doicu; Franz Schreier; Sergei Hrechanyy; Klaus Kretschel; Markus Meringer; Michael Hess 002; Sebastian Gimeno-Garcia; Heinrich Bovensmann; Kai-Uwe Eichmann; Stefan Noël; et al. (IGARSS, 2011)

Mathematical Chemistry and Chemoinformatics - Structure Generation, Elucidation and Quantitative Structure-Property Relationships. - Adalbert Kerber; Reinhard Laue; Markus Meringer; Christoph Rücker; Emma Schymanski (de Gruyter, 2013)

Beyond Terrestrial Biology: Charting the Chemical Universe of α-Amino Acid Structures. - Markus Meringer; H. James Cleaves II; Stephen J. Freeland (J. Chem. Inf. Model., 2013)

Adaptive Properties of the Amino Acid Alphabet and its Subsets. - Rudrarup Bose; Markus Meringer; Melissa Ilardo; H. James Cleaves II (ALIFE, 2018)

One Among Millions: The Chemical Space of Nucleic Acid-Like Molecules. - Henderson James Cleaves II; Christopher J. Butch; Pieter Buys Burger; Jay Goodwin; Markus Meringer (J. Chem. Inf. Model., 2019)

The Aeolus Data Innovation and Science Cluster. - Isabell Krisch; Oliver Reitebuch; Jonas von Bismarck; Tommaso Parrinello; Michael Rennie; Fabian Weiler; Dorit Huber; Jos de Kloe; Alain Dabas; Anne Grete Straume-Lindner; Saleh Abdalla; Stefano Aprile; et al. (IGARSS, 2021)