Analyzing tumor gene expression profiles. - Carsten Peterson; Markus Ringnér (Artif. Intell. Medicine, 2003)

ACID: a database for microarray clone information. - Markus Ringnér; Srinivas Veerla; Samuel Andersson; Johan Staaf; Jari Häkkinen (Bioinform., 2004)

Multiclass discovery in array data. - Yingchun Liu; Markus Ringnér (BMC Bioinform., 2004)

A strategy for identifying putative causes of gene expression variation in human cancers. - Sampsa Hautaniemi; Markus Ringnér; Päivikki Kauraniemi; Reija Autio; Henrik Edgren; Olli Yli-Harja; Jaakko Astola; Anne Kallioniemi; Olli-Pekka Kallioniemi (J. Frankl. Inst., 2004)

Folding Free Energies of 5′-UTRs Impact Post-Transcriptional Regulation on a Genomic Scale in Yeast. - Markus Ringnér; Morten Krogh (PLoS Comput. Biol., 2005)

Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios. - Johan Staaf; Johan Vallon-Christersson; David Lindgren; Gunnar Juliusson; Richard Rosenquist; Mattias Höglund; Åke Borg; Markus Ringnér (BMC Bioinform., 2008)