HomozygosityMapper - an interactive approach to homozygosity mapping. - Dominik Seelow; Markus Schuelke; Friedhelm Hildebrandt; Peter Nürnberg (Nucleic Acids Res., 2009)

HomozygosityMapper2012 - bridging the gap between homozygosity mapping and deep sequencing. - Dominik Seelow; Markus Schuelke (Nucleic Acids Res., 2012)

MutationDistiller: user-driven identification of pathogenic DNA variants. - Daniela Hombach; Markus Schuelke; Ellen Knierim; Nadja Ehmke; Jana Marie Schwarz; Björn Fischer-Zirnsak; Dominik Seelow (Nucleic Acids Res., 2019)

RegulationSpotter: annotation and interpretation of extratranscriptic DNA variants. - Jana Marie Schwarz; Daniela Hombach; Sebastian Köhler 001; David N. Cooper; Markus Schuelke; Dominik Seelow (Nucleic Acids Res., 2019)

MutationTaster2021. - Robin Steinhaus; Sebastian Proft; Markus Schuelke; David N. Cooper; Jana Marie Schwarz; Dominik Seelow (Nucleic Acids Res., 2021)

RegEl corpus: identifying DNA regulatory elements in the scientific literature. - Samuele Garda; Freyda Lenihan-Geels; Sebastian Proft; Stefanie Hochmuth; Markus Schuelke; Dominik Seelow; Ulf Leser (Database J. Biol. Databases Curation, 2022)