Bestimmung molekularer Ähnlichkeit mit Hilfe eines Genetischen Algorithmus. - Markus Wagener (1993)

A Systemsatic Approach to Finding New Lead Structures Having Biological Activity. - Christof H. Schwab; Sandra Handschuh; Andreas Teckentrup; Markus Wagener; Jens Sadowski; Johann Gasteiger; Paul Levi; T. Will; Andreas Zell; H. Siemens; Gerhard Klebe; Thomas Mietzner; et al. (German Conference on Bioinformatics - Selected Papers, 1996)

The comparison of geometric and electronic properties of molecular surfaces by neural networks: Application to the analysis of corticosteroid-binding globulin activity of steroids. - Soheila Anzali; Gerhard Barnickel; Michael Krug; Jens Sadowski; Markus Wagener; Johann Gasteiger; Jaroslaw Polanski (J. Comput. Aided Mol. Des., 1996)

Locating Biologically Active Compounds in Medium-Sized Heterogeneous Datasets by Topological Autocorrelation Vectors: Dopamine and Benzodiazepine Agonists. - Henri Bauknecht; Andreas Zell; Harald Bayer; Paul Levi; Markus Wagener; Jens Sadowski; Johann Gasteiger (J. Chem. Inf. Comput. Sci., 1996)

Superposition of Three-Dimensional Chemical Structures Allowing for Conformational Flexibility by a Hybrid Method. - Sandra Handschuh; Markus Wagener; Johann Gasteiger (J. Chem. Inf. Comput. Sci., 1998)

Potential Drugs and Nondrugs: Prediction and Identification of Important Structural Features. - Markus Wagener; Vincent J. van Geerestein (J. Chem. Inf. Comput. Sci., 2000)

Seventh International Conference on Chemical Structures June 5-9, 2005 Noordwijkerhout, The Netherlands. - Robert W. Snyder; Markus Wagener (J. Chem. Inf. Model., 2006)

The Quest for Bioisosteric Replacements. - Markus Wagener; Jos P. M. Lommerse (J. Chem. Inf. Model., 2006)

Fleksy: a flexible approach to induced fit docking. - Markus Wagener; Sander B. Nabuurs; Jacob de Vlieg (J. Cheminformatics, 2010)

Extraction of useful bioisostere replacments from the PDB. - Tina Ritschel; David J. Wood; Jacob de Vlieg; Markus Wagener (J. Cheminformatics, 2011)

Flexible protein-ligand docking using the Fleksy protocol. - Markus Wagener; Jacob de Vlieg; Sander B. Nabuurs (J. Comput. Chem., 2012)

Pharmacophore Fingerprint-Based Approach to Binding Site Subpocket Similarity and Its Application to Bioisostere Replacement. - David J. Wood; Jacob de Vlieg; Markus Wagener; Tina Ritschel (J. Chem. Inf. Model., 2012)

10th ICCS/GCC Conference: 40 Years of Cheminformatics. - Markus Wagener; Frank Oellien; Uli Fechner; Matthias Rarey (J. Chem. Inf. Model., 2015)