Metagenomic read clustering based on overlap graphs. - Marleen Balvert; Alexander Schönhuth; Bas E. Dutilh (ICCABS, 2018)

An image representation based convolutional network for DNA classification. - Bojian Yin; Marleen Balvert; Davide Zambrano; Alexander Schönhuth; Sander M. Bohté (ICLR (Poster), 2018)

Using the structure of genome data in the design of deep neural networks for predicting amyotrophic lateral sclerosis from genotype. - Bojian Yin; Marleen Balvert; Rick A. A. van der Spek; Bas E. Dutilh; Sander M. Bohté; Jan Veldink; Alexander Schönhuth (Bioinform., 2019)

A Drug Recommendation System (Dr.S) for cancer cell lines. - Marleen Balvert; Georgios Patoulidis; Andrew Patti; Timo M. Deist; Christine Eyler; Bas E. Dutilh; Alexander Schönhuth; David Craft (CoRR, 2019)

Artificial Intelligence: Understanding Diseases that People Cannot Understand? - Marleen Balvert; Alexander Schönhuth (ERCIM News, 2019)

Robust Optimization of Dose-Volume Metrics for Prostate HDR-Brachytherapy Incorporating Target and OAR Volume Delineation Uncertainties. - Marleen Balvert; Dick den Hertog; Aswin L. Hoffmann (INFORMS J. Comput., 2019)

12 Grand Challenges in Single-Cell Data Science. - David Laehnemann; Johannes Köster; Ewa Szczurek; Davis J. McCarthy; Stephanie C. Hicks; Mark D. Robinson; Catalina A. Vallejos; Niko Beerenwinkel; Kieran R. Campbell; Ahmed Mahfouz; Luca Pinello; Pavel Skums; et al. (PeerJ Prepr., 2019)

A Universal and Structured Way to Derive Dual Optimization Problem Formulations. - Kees Roos; Marleen Balvert; Bram L. Gorissen; Dick den Hertog (INFORMS J. Optim., 2020)

OGRE: Overlap Graph-based metagenomic Read clustEring. - Marleen Balvert; Xiao Luo; Ernestina Hauptfeld; Alexander Schönhuth; Bas E. Dutilh (Bioinform., 2021)

Iterative Rule Extension for Logic Analysis of Data: an MILP-based heuristic to derive interpretable binary classification from large datasets. - Marleen Balvert (CoRR, 2021)

Image-Based Body Shape Estimation to Detect Malnutrition. - Hezha MohammedKhan; Çiçek Güven; Marleen Balvert; Eric O. Postma (IntelliSys (2), 2023)

Iterative Rule Extension for Logic Analysis of Data: An MILP-Based Heuristic to Derive Interpretable Binary Classifiers from Large Data Sets. - Marleen Balvert (INFORMS J. Comput., 2024)