Assessment and optimisation of normalisation methods for dual-colour antibody microarrays. - Martin Sill; Christoph Schröder; Jörg D. Hoheisel; Axel Benner; Manuela Zucknick (BMC Bioinform., 2010)

Robust biclustering by sparse singular value decomposition incorporating stability selection. - Martin Sill; Sebastian Kaiser; Axel Benner; Annette Kopp-Schneider (Bioinform., 2011)

Applying stability selection to consistently estimate sparse principal components in high-dimensional molecular data. - Martin Sill; Maral Saadati; Axel Benner (Bioinform., 2015)

DNA methylation-based classification of central nervous system tumours. - David Capper; David T. W. Jones; Martin Sill; Volker Hovestadt; Daniel Schrimpf; Dominik Sturm; Christian Koelsche; Felix Sahm; Lukas Chavez; David E. Reuss; Annekathrin Kratz; Annika K. Wefers; et al. (Nat., 2018)

RF_Purify: a novel tool for comprehensive analysis of tumor-purity in methylation array data based on random forest regression. - Pascal David Johann; Natalie Jäger; Stefan M. Pfister; Martin Sill (BMC Bioinform., 2019)

Conumee 2.0: enhanced copy-number variation analysis from DNA methylation arrays for humans and mice. - Bjarne Daenekas; Eilís Pérez; Fabio Boniolo; Sabina Stefan; Salvatore Benfatto; Martin Sill; Dominik Sturm; David T. W. Jones; David Capper; Marc Zapatka; Volker Hovestadt (Bioinform., 2024)