Separation of nearly identical repeats in shotgun assemblies using defined nucleotide positions, DNPs. - Martti T. Tammi; Erik Arner; Tom Britton; Björn Andersson (Bioinform., 2002)

TRAP: Tandem Repeat Assembly Program produces improved shotgun assemblies of repetitive sequences. - Martti T. Tammi; Erik Arner; Björn Andersson (Comput. Methods Programs Biomed., 2003)

ReDiT: Repeat Discrepancy Tagger-a shotgun assembly finishing aid. - Martti T. Tammi; Erik Arner; Ellen Kindlund; Björn Andersson (Bioinform., 2004)

DNPTrapper: an assembly editing tool for finishing and analysis of complex repeat regions. - Erik Arner; Martti T. Tammi; Anh-Nhi Tran; Ellen Kindlund; Björn Andersson (BMC Bioinform., 2006)

MicroTar: predicting microRNA targets from RNA duplexes. - Rahul Thadani; Martti T. Tammi (BMC Bioinform., 2006)

AllerTool: a web server for predicting allergenicity and allergic cross-reactivity in proteins. - Zong Hong Zhang; Judice L. Y. Koh; Guanglan Zhang; Khar Heng Choo; Martti T. Tammi; Joo Chuan Tong (Bioinform., 2007)

GRAT - genome-scale rapid alignment tool. - Ellen Kindlund; Martti T. Tammi; Erik Arner; Daniel Nilsson; Björn Andersson (Comput. Methods Programs Biomed., 2007)

The value of position-specific scoring matrices for assessment of protein allegenicity. - Shen Jean Lim; Joo Chuan Tong; Fook Tim Chew; Martti T. Tammi (BMC Bioinform., 2008)

Allergen Atlas: a comprehensive knowledge center and analysis resource for allergen information. - Joo Chuan Tong; Shen Jean Lim; Hon Cheng Muh; Fook Tim Chew; Martti T. Tammi (Bioinform., 2009)

CNV-seq, a new method to detect copy number variation using high-throughput sequencing. - Chao Xie; Martti T. Tammi (BMC Bioinform., 2009)

CORNAS: coverage-dependent RNA-Seq analysis of gene expression data without biological replicates. - Joel Z. B. Low; Tsung Fei Khang; Martti T. Tammi (BMC Bioinform., 2017)