Multiscale characterization of macromolecular dynamics: application to photoacitve yellow protein. - Mary A. Rohrdanz; Wenwei Zheng; Bradley Lambeth; Cecilia Clementi (XSEDE, 2013)

Multiscale Approach to the Determination of the Photoactive Yellow Protein Signaling State Ensemble. - Mary A. Rohrdanz; Wenwei Zheng; Bradley Lambeth; Jocelyne Vreede; Cecilia Clementi (PLoS Comput. Biol., 2014)

RPPA SPACE: an R package for normalization and quantitation of Reverse-Phase Protein Array data. - Huma Shehwana; Shwetha V. Kumar; James M. Melott; Mary A. Rohrdanz; Chris Wakefield; Zhenlin Ju; Doris R. Siwak; Yiling Lu; Bradley M. Broom; John N. Weinstein; Gordon B. Mills; Rehan Akbani (Bioinform., 2022)