neoepiscope improves neoepitope prediction with multivariant phasing. - Mary A Wood; Austin Nguyen; Adam J. Struck; Kyle Ellrott; Abhinav Nellore; Reid F. Thompson (Bioinform., 2020)

pepsickle rapidly and accurately predicts proteasomal cleavage sites for improved neoantigen identification. - Benjamin R. Weeder; Mary A Wood; Ellysia Li; Abhinav Nellore; Reid F. Thompson (Bioinform., 2021)