A procedure for assessing GO annotation consistency. - Mary E. Dolan; Li Ni; Evelyn Camon; Judith A. Blake (ISMB (Supplement of Bioinformatics), 2005)

Using Ontology Visualization to Coordinate Cross-species Functional Annotation for Human Disease Genes. - Mary E. Dolan; Judith A. Blake (CBMS, 2006)

Using Ontology Graphs to Understand Annotations and Reason about Them. - Mary E. Dolan; Judith A. Blake (KR-MED, 2006)

Genomes as geography: using GIS technology to build interactive genome feature maps. - Mary E. Dolan; Constance C. Holden; M. Kate Beard; Carol J. Bult (BMC Bioinform., 2006)

Using ontology visualization to facilitate access to knowledge about human disease genes. - Mary E. Dolan; Judith A. Blake (Appl. Ontology, 2009)

Waiting for a Robust Disease Ontology: A Merger of OMIM and MeSH as a Practical Interim Solution. - Susan M. Bello; Allan Peter Davis; Thomas C. Wiegers; Mary E. Dolan; Cynthia L. Smith; Joel E. Richardson; Judith A. Blake; Carolyn J. Mattingly; Janan T. Eppig (ICBO, 2011)

Disease model curation improvements at Mouse Genome Informatics. - Susan M. Bello; Joel E. Richardson; Allan Peter Davis; Thomas C. Wiegers; Carolyn J. Mattingly; Mary E. Dolan; Cynthia L. Smith; Judith A. Blake; Janan T. Eppig (Database J. Biol. Databases Curation, 2012)

OncoCL: A Cancer Cell Ontology. - Karen E. Rasmussen; Mary E. Dolan (ICBO, 2013)

Methodology for the inference of gene function from phenotype data. - Joao A. Ascensao; Mary E. Dolan; David P. Hill; Judith A. Blake (BMC Bioinform., 2014)

OncoCL-KB, a Knowledgebase for Integration of Clinical and Molecular Cancer Data. - Mary E. Dolan (SWAT4LS, 2015)

Automated generation of gene summaries at the Alliance of Genome Resources. - Ranjana Kishore; Valerio Arnaboldi; Ceri E. Van Slyke; Juancarlos Chan; Robert S. Nash; Jose-Maria Urbano; Mary E. Dolan; Stacia R. Engel; Mary Shimoyama; Paul W. Sternberg; The Alliance of Genome Resources (Database J. Biol. Databases Curation, 2020)

Alliance of Genome Resources Portal: unified model organism research platform. - Julie Agapite; Laurent-Philippe Albou; Suzi A. Aleksander; Joanna Argasinska; Valerio Arnaboldi; Helen Attrill; Susan M. Bello; Judith A. Blake; Olin Blodgett; Yvonne M. Bradford; Carol J. Bult; Scott Cain; et al. (Nucleic Acids Res., 2020)

Mouse Genome Database (MGD): Knowledgebase for mouse-human comparative biology. - Judith A. Blake; Richard M. Baldarelli; James A. Kadin; Joel E. Richardson; Cynthia L. Smith; Carol J. Bult; Anna V. Anagnostopoulos; Jon S. Beal; Susan M. Bello; Olin Blodgett; Nancy E. Butler; Jeff Campbell; et al. (Nucleic Acids Res., 2021)

The Gene Ontology resource: enriching a GOld mine. - Seth Carbon; Eric Douglass; Benjamin M. Good; Deepak R. Unni; Nomi L. Harris; Christopher J. Mungall; Siddartha Basu; Rex L. Chisholm; Robert J. Dodson; Eric Hartline; Petra Fey; Paul D. Thomas; et al. (Nucleic Acids Res., 2021)