Overcoming drug resistance by co-targeting. - Marzieh Ayati; Golnaz Taheri; Shahriar Arab; Limsoon Wong; Changiz Eslahchi (BIBM, 2010)

Algorithms for detecting complementary SNPs within a region of interest that are associated with diseases. - Sinan Erten; Marzieh Ayati; Yu Liu 093; Mark R. Chance; Mehmet Koyutürk (BCB, 2012)

Prioritization of genomic locus pairs for testing epistasis. - Marzieh Ayati; Mehmet Koyutürk (BCB, 2014)

What Do We Learn from Network-Based Analysis of Genome-Wide Association Data? - Marzieh Ayati; Sinan Erten; Mehmet Koyutürk (EvoApplications, 2014)

Assessing the collective disease association of multiple genomic loci. - Marzieh Ayati; Mehmet Koyutürk (BCB, 2015)

MOBAS: identification of disease-associated protein subnetworks using modularity-based scoring. - Marzieh Ayati; Sinan Erten; Mark R. Chance; Mehmet Koyutürk (EURASIP J. Bioinform. Syst. Biol., 2015)

Two scenarios for overcoming drug resistance by co-targeting. - Golnaz Taheri; Marzieh Ayati; Limsoon Wong; Changiz Eslahchi (Int. J. Bioinform. Res. Appl., 2015)

MoBaS on Phosphorylation Data. - Marzieh Ayati; Danica Wiredja; Daniela Schlatzer; Goutham Narla; Mark R. Chance; Mehmet Koyutürk (BCB, 2016)

PoCos: Population Covering Locus Sets for Risk Assessment in Complex Diseases. - Marzieh Ayati; Mehmet Koyutürk (PLoS Comput. Biol., 2016)

CoPhosK: A method for comprehensive kinase substrate annotation using co-phosphorylation analysis. - Marzieh Ayati; Danica Wiredja; Daniela Schlatzer; Sean Maxwell; Ming Li 022; Mehmet Koyutürk; Mark R. Chance (PLoS Comput. Biol., 2019)

Co-phosphorylation networks reveal subtype-specific signaling modules in breast cancer. - Marzieh Ayati; Mark R. Chance; Mehmet Koyutürk (Bioinform., 2021)

Deep Learning Model With Adaptive Regularization for EEG-Based Emotion Recognition Using Temporal and Frequency Features. - Alireza Samavat; Ebrahim Khalili; Bentolhoda Ayati; Marzieh Ayati (IEEE Access, 2022)

Functional characterization of co-phosphorylation networks. - Marzieh Ayati; Serhan Yilmaz; Mark R. Chance; Mehmet Koyutürk (Bioinform., 2022)