UTGB/medaka: genomic resource database for medaka biology. - Budrul Ahsan; Daisuke Kobayashi; Tomoyuki Yamada; Masahiro Kasahara; Shin Sasaki; Taro L. Saito; Yukinobu Nagayasu; Koichiro Doi; Yoichiro Nakatani; Wei Qu; Tomoko Jindo; Atsuko Shimada; et al. (Nucleic Acids Res., 2008)

Introducing difference recurrence relations for faster semi-global alignment of long sequences. - Hajime Suzuki; Masahiro Kasahara (BMC Bioinform., 2018)

MoMI-G: modular multi-scale integrated genome graph browser. - Toshiyuki T. Yokoyama; Yoshitaka Sakamoto; Masahide Seki; Yutaka Suzuki; Masahiro Kasahara (BMC Bioinform., 2019)

LPMX: a pure rootless composable container system. - Xu Yang; Masahiro Kasahara (BMC Bioinform., 2022)