Extracting Drug-Drug Interactions with Attention CNNs. - Masaki Asada; Makoto Miwa; Yutaka Sasaki (BioNLP, 2017)

Enhancing Drug-Drug Interaction Extraction from Texts by Molecular Structure Information. - Masaki Asada; Makoto Miwa; Yutaka Sasaki (ACL (2), 2018)

Using drug descriptions and molecular structures for drug-drug interaction extraction from literature. - Masaki Asada; Makoto Miwa; Yutaka Sasaki (Bioinform., 2021)

Representing a Heterogeneous Pharmaceutical Knowledge-Graph with Textual Information. - Masaki Asada; Nallappan Gunasekaran; Makoto Miwa; Yutaka Sasaki (Frontiers Res. Metrics Anal., 2021)

Integrating Heterogeneous Domain Information into Relation Extraction: A Case Study on Drug-Drug Interaction Extraction. - Masaki Asada (CoRR, 2022)

BioNART: A Biomedical Non-AutoRegressive Transformer for Natural Language Generation. - Masaki Asada; Makoto Miwa (BioNLP@ACL, 2023)

Integrating heterogeneous knowledge graphs into drug-drug interaction extraction from the literature. - Masaki Asada; Makoto Miwa; Yutaka Sasaki (Bioinform., 2023)

Enhancing Relation Extraction from Biomedical Texts by Large Language Models. - Masaki Asada; Ken Fukuda (HCI (53), 2024)

BERT-NAR-BERT: A Non-Autoregressive Pre-Trained Sequence-to-Sequence Model Leveraging BERT Checkpoints. - Mohammad Golam Sohrab; Masaki Asada; Matiss Rikters; Makoto Miwa (IEEE Access, 2024)

A Video-grounded Dialogue Dataset and Metric for Event-driven Activities. - Wiradee Imrattanatrai; Masaki Asada; Kimihiro Hasegawa; Zhi-Qi Cheng; Ken Fukuda; Teruko Mitamura (AAAI, 2025)

Improving Relation Extraction by Sequence-to-sequence-based Dependency Parsing Pre-training. - Masaki Asada; Makoto Miwa (COLING, 2025)

Addressing the Training-Inference Discrepancy in Discrete Diffusion for Text Generation. - Masaki Asada; Makoto Miwa (COLING, 2025)

ELAINE-medLLM: Lightweight English Japanese Chinese Trilingual Large Language Model for Bio-medical Domain. - Ken Yano; Zheheng Luo; Jimin Huang; Qianqian Xie; Masaki Asada; Chenhan Yuan; Kailai Yang; Makoto Miwa; Sophia Ananiadou; Jun'ichi Tsujii (COLING, 2025)

Leveraging Domain-Specific Databases for Seq2Seq-Based Relation Extraction from Materials Science Texts. - Masaki Asada; Ken Fukuda (HCI (57), 2025)

ProMQA: Question Answering Dataset for Multimodal Procedural Activity Understanding. - Kimihiro Hasegawa; Wiradee Imrattanatrai; Zhi-Qi Cheng; Masaki Asada; Susan Holm; Yuran Wang; Ken Fukuda; Teruko Mitamura (NAACL (Long Papers), 2025)