A program code generator for multiphysics biological simulation using markup languages. - Akira Amano; Masanari Kawabata; Yoshiharu Yamashita; Florencio Rusty B. Punzalan; Takao Shimayoshi; Hiroaki Kuwabara; Yoshitoshi Kunieda (EMBC, 2012)

A CellML simulation compiler and code generator using ODE solving schemes. - Florencio Rusty B. Punzalan; Yoshiharu Yamashita; Naoki Soejima; Masanari Kawabata; Takao Shimayoshi; Hiroaki Kuwabara; Yoshitoshi Kunieda; Akira Amano (Source Code Biol. Medicine, 2012)

Code generator for distributed parameter biological model simulation with PDE numerical schemes. - Florencio Rusty B. Punzalan; Yoshiharu Yamashita; Masanari Kawabata; Takao Shimayoshi; Hiroaki Kuwabara; Yoshitoshi Kunieda; Akira Amano (EMBC, 2013)