Automated prior knowledge-based quantification of neuronal patterns in the spinal cord of zebrafish. - Johannes Stegmaier; Maryam Shahid; Masanari Takamiya; Lixin Yang; Sepand Rastegar; Markus Reischl; Uwe Strähle; Ralf Mikut (Bioinform., 2014)

Automation strategies for large-scale 3D image analysis. - Johannes Stegmaier; Benjamin Schott; Eduard Hübner; Manuel Traub; Maryam Shahid; Masanari Takamiya; Andrei Kobitski; Volker Hartmann; Rainer Stotzka; Jos van Wezel; Achim Streit; G. Ulrich Nienhaus; et al. (Autom., 2016)

Challenges of Integrating A Priori Information Efficiently in the Discovery of Spatio-Temporal Objects in Large Databases. - Benjamin Schott; Johannes Stegmaier; Masanari Takamiya; Ralf Mikut (CoRR, 2016)

EmbryoMiner: A new framework for interactive knowledge discovery in large-scale cell tracking data of developing embryos. - Benjamin Schott; Manuel Traub; Cornelia Schlagenhauf; Masanari Takamiya; Thomas Antritter; Andreas Bartschat; Katharina Löffler; Denis Blessing; Jens C. Otte; Andrei Kobitski; G. Ulrich Nienhaus; Uwe Strähle; et al. (PLoS Comput. Biol., 2018)