GOAL: automated Gene Ontology analysis of expression profiles. - Stefano Volinia; Rita Evangelisti; Francesca Francioso; Diego Arcelli; Massimo Carella; Paolo Gasparini (Nucleic Acids Res., 2004)

On the statistical assessment of classifiers using DNA microarray data. - Nicola Ancona; Rosalia Maglietta; Ada Piepoli; Annarita D'Addabbo; R. Cotugno; M. Savino; Sabino Liuni; Massimo Carella; Graziano Pesole; Francesco Perri (BMC Bioinform., 2006)

Statistical assessment of functional categories of genes deregulated in pathological conditions by using microarray data. - Rosalia Maglietta; Ada Piepoli; Domenico Catalano; Piepoli Licciulli; Massimo Carella; Sabino Liuni; Graziano Pesole; Francesco Perri; Nicola Ancona (Bioinform., 2007)

Statistical Assessment of MSigDB Gene Sets in Colon Cancer. - Angela Distaso; Luca Abatangelo; Rosalia Maglietta; Teresa Maria Creanza; Ada Piepoli; Massimo Carella; Annarita D'Addabbo; Sayan Mukherjee 001; Nicola Ancona (KES (2), 2008)

Overlapping Genes May Control Reprogramming of Mouse Somatic Cells into Induced Pluripotent Stem Cells (iPSCs) and Breast Cancer Stem Cells. - Ettore Mosca; Cinzia Cocola; Davood Sabour; Paride Pelucchi; Giovanni Bertalot; Orazio Palumbo; Massimo Carella; Martin Götte; Hans R. Schöler; Rolland A. Reinbold; Ileana Zucchi; Luciano Milanesi (Silico Biol., 2010)

On the reproducibility of results of pathway analysis in genome-wide expression studies of colorectal cancers. - Rosalia Maglietta; Angela Distaso; Ada Piepoli; Orazio Palumbo; Massimo Carella; Annarita D'Addabbo; Sayan Mukherjee 001; Nicola Ancona (J. Biomed. Informatics, 2010)

BEAT: Bioinformatics Exon Array Tool to store, analyze and visualize Affymetrix GeneChip Human Exon Array data from disease experiments. - Arianna Consiglio; Massimo Carella; Giorgio De Caro; Gianfranco Delle Foglie; Candida Giovannelli; Giorgio Grillo; Massimo Ianigro; Flavio Licciulli; Orazio Palumbo; Ada Piepoli; Elena Ranieri; Sabino Liuni (BMC Bioinform., 2012)

High-confidence assessment of functional impact of human mitochondrial non-synonymous genome variations by APOGEE. - Stefano Castellana; Caterina Fusilli; Gianluigi Mazzoccoli; Tommaso Biagini; Daniele Capocefalo; Massimo Carella; Angelo L. Vescovi; Tommaso Mazza (PLoS Comput. Biol., 2017)

A comparative benchmark of classic DNA motif discovery tools on synthetic data. - Stefano Castellana; Tommaso Biagini; Luca Parca; Francesco Petrizzelli; Salvatore Daniele Bianco; Angelo Luigi Vescovi; Massimo Carella; Tommaso Mazza (Briefings Bioinform., 2021)

MitImpact 3: modeling the residue interaction network of the Respiratory Chain subunits. - Stefano Castellana; Tommaso Biagini; Francesco Petrizzelli; Luca Parca; Noemi Panzironi; Viviana Caputo; Angelo L. Vescovi; Massimo Carella; Tommaso Mazza (Nucleic Acids Res., 2021)