Identification of protein-protein complexation area. - Mateusz Banach; Irena Roterman (Bio Algorithms Med Syst., 2010)

Ab initio protein structure prediction - the hydrophobicity distribution analysis. - Giuseppe Evangelista; Giovanni Minervini; Fabio Polticelli; Maciej Malawski; Tomasz Szepieniec; Lukasz Flis; Katarzyna Prymula; Marek Kochanczyk; Ewa Matczynska; Zdzislaw Wisniowski; Kinga Salapa; Mateusz Banach; et al. (Bio Algorithms Med Syst., 2011)

Stability of Two Natural Homologous Proteins with Different Folds. - Leszek Konieczny; Mateusz Banach; Irena Roterman (Bio Algorithms Med Syst., 2012)

Structural role of exons in hemoglobin. - Monika Piwowar; Mateusz Banach; Leszek Konieczny; Jacques Chomilier; Irena Roterman (Bio Algorithms Med Syst., 2013)

Structural role of exon-coded fragments in proteins. - Monika Piwowar; Mateusz Banach; Leszek Konieczny; Irena Roterman (Bio Algorithms Med Syst., 2013)

Application of divergence entropy to characterize the structure of lipid-binding proteins. - Roksana Rosicka; Mateusz Banach; Irena Roterman-Konieczna (Bio Algorithms Med Syst., 2015)

Hydrophobic core structure of macromomycin - the apoprotein of the antitumor antibiotic auromomycin - fuzzy oil drop model applied. - Irena Roterman-Konieczna; Mateusz Banach; Leszek Konieczny (Bio Algorithms Med Syst., 2015)

Application of Divergence Entropy to Characterize the Structure of the Hydrophobic Core in DNA Interacting Proteins. - Barbara Kalinowska; Mateusz Banach; Leszek Konieczny; Irena Roterman (Entropy, 2015)

Dissimilar sequence: similar structure of proteins. - Mateusz Banach; Leszek Konieczny; Irena Roterman (Bio Algorithms Med Syst., 2016)

Role of Disulfide Bonds in Stabilizing the Conformation of Selected Enzymes - An Approach Based on Divergence Entropy Applied to the Structure of Hydrophobic Core in Proteins. - Mateusz Banach; Barbara Kalinowska; Leszek Konieczny; Irena Roterman (Entropy, 2016)

Influence of the Aqueous Environment on Protein Structure - A Plausible Hypothesis Concerning the Mechanism of Amyloidogenesis. - Irena Roterman; Mateusz Banach; Barbara Kalinowska; Leszek Konieczny (Entropy, 2016)

Structure of hydrophobic core in plant carboxylesterase. - Mateusz Banach; Leszek Konieczny; Zdzislaw Wisniowski; Irena Roterman (Bio Algorithms Med Syst., 2017)

The variability of protein structure with respect to the hydrophobic core. - Mateusz Banach; Zdzislaw Wisniowski; Barbara Kalinowska; Leszek Konieczny; Irena Roterman (Bio Algorithms Med Syst., 2017)

Mechanism of ligand binding - PDZ domain taken as example. - Dawid Dulak; Mateusz Banach; Zdzislaw Wisniowski; Leszek Konieczny; Irena Roterman (Bio Algorithms Med Syst., 2017)

Role of the hydrophobic core in cytoskeleton protein: cardiac myosin binding protein C. - Maria Golda; Mateusz Banach; Zdzislaw Wisniowski; Wojciech Ziajka; Leszek Konieczny; Irena Roterman (Bio Algorithms Med Syst., 2017)

Chain-chain complexation and heme binding in haemoglobin with respect to the hydrophobic core structure. - Magdalena Ptak; Mateusz Banach; Zdzislaw Wisniowski; Leszek Konieczny; Irena Roterman (Bio Algorithms Med Syst., 2017)

Application of the Fuzzy Oil Drop Model Describes Amyloid as a Ribbonlike Micelle. - Irena Roterman; Mateusz Banach; Leszek Konieczny (Entropy, 2017)

Fragment Aβ(18-41) presented within the CDR3 loop region of a shark immunoglobulin new antigen receptor single-variable domain antibody analyzed based on the fuzzy oil drop model. - Mateusz Banach; Leszek Konieczny; Zdzislaw Wisniowski; Irena Roterman (Bio Algorithms Med Syst., 2018)

Comparison of the structure of Aβ(1-40) amyloid with the one in complex with polyphenol ε-viniferin glucoside (EVG). - Dawid Dulak; Mateusz Banach; Zdzislaw Wisniowski; Leszek Konieczny; Irena Roterman (Bio Algorithms Med Syst., 2018)

Aggregation-promoting conditions necessary to create the complexes by acylphosphatase from the hyperthermophile Sulfolobus solfataricus. - Mateusz Banach; Zdzislaw Wisniowski; Magdalena Ptak; Irena Roterman (Bio Algorithms Med Syst., 2019)

Structural analysis of the Aβ(11-42) amyloid fibril based on hydrophobicity distribution. - Irena Roterman; Dawid Dulak; Malgorzata Gadzala; Mateusz Banach; Leszek Konieczny (J. Comput. Aided Mol. Des., 2019)

Symmetry and Dissymmetry in Protein Structure - System-Coding Its Biological Specificity. - Mateusz Banach; Leszek Konieczny; Irena Roterman (Symmetry, 2019)

The Status of Edge Strands in Ferredoxin-Like Fold. - Mateusz Banach; Piotr Fabian; Katarzyna Stapor; Leszek Konieczny; Magdalena Ptak-Kaczor; Irena Roterman (Symmetry, 2020)

Alternative Hydrophobic Core in Proteins - The Effect of Specific Synergy. - Piotr Fabian; Katarzyna Stapor; Mateusz Banach; Magdalena Ptak-Kaczor; Leszek Konieczny; Irena Roterman (Symmetry, 2020)

Divergence Entropy-Based Evaluation of Hydrophobic Core in Aggressive and Resistant Forms of Transthyretin. - Mateusz Banach; Katarzyna Stapor; Piotr Fabian; Leszek Konieczny; Irena Roterman (Entropy, 2021)

Symmetrization in the Calculation Pipeline of Gauss Function-Based Modeling of Hydrophobicity in Protein Structures. - Mateusz Banach (Symmetry, 2022)