Flexible docking of the fragment of the troponin I to the troponin C. - Jacek Wabik; Mateusz Kurcinski; Andrzej Kolinski (IWBBIO, 2014)

CABS-dock web server for the flexible docking of peptides to proteins without prior knowledge of the binding site. - Mateusz Kurcinski; Michal Jamróz 001; Maciej Blaszczyk; Andrzej Kolinski; Sebastian Kmiecik (Nucleic Acids Res., 2015)

CABS-flex 2.0: a web server for fast simulations of flexibility of protein structures. - Aleksander Kuriata; Aleksandra Maria Gierut; Tymoteusz Oleniecki; Maciej Pawel Ciemny; Andrzej Kolinski; Mateusz Kurcinski; Sebastian Kmiecik (Nucleic Acids Res., 2018)

Protein-peptide docking using CABS-dock and contact information. - Maciej Blaszczyk; Maciej Pawel Ciemny; Andrzej Kolinski; Mateusz Kurcinski; Sebastian Kmiecik (Briefings Bioinform., 2019)

CABS-dock standalone: a toolbox for flexible protein-peptide docking. - Mateusz Kurcinski; Maciej Pawel Ciemny; Tymoteusz Oleniecki; Aleksander Kuriata; Aleksandra E. Badaczewska-Dawid; Andrzej Kolinski; Sebastian Kmiecik (Bioinform., 2019)

CABS-flex standalone: a simulation environment for fast modeling of protein flexibility. - Mateusz Kurcinski; Tymoteusz Oleniecki; Maciej Pawel Ciemny; Aleksander Kuriata; Andrzej Kolinski; Sebastian Kmiecik (Bioinform., 2019)

Aggrescan3D standalone package for structure-based prediction of protein aggregation properties. - Aleksander Kuriata; Valentin Iglesias; Mateusz Kurcinski; Salvador Ventura; Sebastian Kmiecik (Bioinform., 2019)

Aggrescan3D (A3D) 2.0: prediction and engineering of protein solubility. - Aleksander Kuriata; Valentin Iglesias; Jordi Pujols; Mateusz Kurcinski; Sebastian Kmiecik; Salvador Ventura (Nucleic Acids Res., 2019)

MAPIYA contact map server for identification and visualization of molecular interactions in proteins and biological complexes. - Aleksandra E. Badaczewska-Dawid; Chandran Nithin; Karol Wroblewski; Mateusz Kurcinski; Sebastian Kmiecik (Nucleic Acids Res., 2022)

Structure prediction of linear and cyclic peptides using CABS-flex. - Aleksandra E. Badaczewska-Dawid; Karol Wroblewski; Mateusz Kurcinski; Sebastian Kmiecik (Briefings Bioinform., 2024)