SBMLmod: a Python-based web application and web service for efficient data integration and model simulation. - Sascha Schäuble; Anne-Kristin Stavrum; Mathias Bockwoldt; Pål Puntervoll; Ines Heiland (BMC Bioinform., 2017)

ProTaxoVis - protein taxonomic visualisation of presence. - Yin-Chen Hsieh; Mathias Bockwoldt; Ines Heiland (BMC Bioinform., 2025)