Using Public Resource Computing and Systematic Pre-calculation for Large Scale Sequence Analysis. - Thomas Rattei; Mathias C. Walter; Roland Arnold; David P. Anderson; Hans-Werner Mewes (GCCB, 2006)

Beyond the "best" match: machine learning annotation of protein sequences by integration of different sources of information. - Igor V. Tetko; Igor V. Rodchenkov; Mathias C. Walter; Thomas Rattei; Hans-Werner Mewes (Bioinform., 2008)

PEDANT covers all complete RefSeq genomes. - Mathias C. Walter; Thomas Rattei; Roland Arnold; Ulrich Güldener; Martin Münsterkötter; Karamfilka Nenova; Gabi Kastenmüller; Patrick Tischler; Andreas Wölling; Andreas Volz; Norbert Pongratz; Ralf Jost; et al. (Nucleic Acids Res., 2009)

MIPS: curated databases and comprehensive secondary data resources in 2010. - Hans-Werner Mewes; Andreas Ruepp; Fabian J. Theis; Thomas Rattei; Mathias C. Walter; Dmitrij Frishman; Karsten Suhre; Manuel Spannagl; Klaus F. X. Mayer; Volker Stümpflen; Alexey V. Antonov (Nucleic Acids Res., 2011)

FGDB: revisiting the genome annotation of the plant pathogen Fusarium graminearum. - Philip Wong; Mathias C. Walter; Wanseon Lee; Gertrud Mannhaupt; Martin Münsterkötter; Hans-Werner Mewes; Gerhard Adam; Ulrich Güldener (Nucleic Acids Res., 2011)

HoPaCI-DB: host-Pseudomonas and Coxiella interaction database. - Sophie Bleves; Irmtraud Dunger; Mathias C. Walter; Dimitrios Frangoulidis; Gabi Kastenmüller; Romé Voulhoux; Andreas Ruepp (Nucleic Acids Res., 2014)

eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences. - Jaime Huerta-Cepas; Damian Szklarczyk; Kristoffer Forslund; Helen Cook; Davide Heller; Mathias C. Walter; Thomas Rattei; Daniel R. Mende; Shinichi Sunagawa; Michael Kuhn 004; Lars Juhl Jensen; Christian von Mering; et al. (Nucleic Acids Res., 2016)

FlexTaxD: flexible modification of taxonomy databases for improved sequence classification. - David Sundell; Caroline Öhrman; Daniel Svensson; Edvin Karlsson; Björn Brindefalk; Kerstin Myrtennäs; Jon Ahlinder; Markus H. Antwerpen; Mathias C. Walter; Mats Forsman; Per Stenberg; Andreas Sjödin (Bioinform., 2021)