SuRankCo: supervised ranking of contigs in de novo assemblies. - Mathias Kuhring; Piotr Wojtek Dabrowski; Vitor Piro; Andreas Nitsche; Bernhard Y. Renard (BMC Bioinform., 2015)

AltamISA: a Python API for ISA-Tab files. - Mathias Kuhring; Mikko Nieminen; Jennifer Kirwan; Dieter Beule; Manuel Holtgrewe (J. Open Source Softw., 2019)

Computational Methods for Omics Sequence Data with Focus on Non-Model Organisms - Mathias Kuhring (2019)