FRED 2: an immunoinformatics framework for Python. - Benjamin Schubert; Mathias Walzer; Hans-Philipp Brachvogel; András Szolek; Christopher Mohr; Oliver Kohlbacher (Bioinform., 2016)

ImmunoNodes - graphical development of complex immunoinformatics workflows. - Benjamin Schubert; Luis de la Garza; Christopher Mohr; Mathias Walzer; Oliver Kohlbacher (BMC Bioinform., 2017)

The PRIDE database and related tools and resources in 2019: improving support for quantification data. - Yasset Pérez-Riverol; Attila Csordas; Jingwen Bai 003; Manuel Bernal Llinares; Suresh Hewapathirana; Deepti Jaiswal Kundu; Avinash Inuganti; Johannes Griss; Gerhard Mayer; Martin Eisenacher; Enrique Pérez; Julian Uszkoreit; et al. (Nucleic Acids Res., 2019)

Expression Atlas update: gene and protein expression in multiple species. - Pablo A. Moreno; Silvie Fexova; Nancy George; Jonathan R. Manning; Zhichao Miao; Suhaib Mohammed; Alfonso Muñoz-Pomer Fuentes; Anja Füllgrabe; Yalan Bi; Natassja Bush; Haider Iqbal; Upendra Kumbham; et al. (Nucleic Acids Res., 2022)

The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences. - Yasset Pérez-Riverol; Jingwen Bai 003; Chakradhar Bandla; David García-Seisdedos; Suresh Hewapathirana; Selvakumar Kamatchinathan; Deepti Jaiswal Kundu; Ananth Prakash; Anika Frericks-Zipper; Martin Eisenacher; Mathias Walzer; Shengbo Wang; et al. (Nucleic Acids Res., 2022)