Incremental Inference of Relational Motifs with a Degenerate Alphabet. - Nadia Pisanti; Henry Soldano; Mathilde Carpentier (CPM, 2005)

RPBS: a web resource for structural bioinformatics. - C. Alland; François Moreews; D. Boens; Mathilde Carpentier; S. Chiusa; Mathieu Lonquety; N. Renault; Y. Wong; Hubert Cantalloube; Jacques Chomilier; Joëlle Hochez; Joël Pothier; et al. (Nucleic Acids Res., 2005)

Méthodes de détection des similarités structurales : caractérisation des motifs conservés dans les familles de structures pour l'annotation des génomes. (Structural similarity detection methods: characterisation of conserved motifs in protein structure families for genome annotation). - Mathilde Carpentier (2005)

A Relational Extension of the Notion of Motifs: Application to the Common 3D Protein Substructures Searching Problem. - Nadia Pisanti; Henry Soldano; Mathilde Carpentier; Joël Pothier (J. Comput. Biol., 2009)

Protein multiple alignments: sequence-based versus structure-based programs. - Mathilde Carpentier; Jacques Chomilier (Bioinform., 2019)

La structure des protéines et son évolution. (Protein Structure and Evolution). - Mathilde Carpentier (2023)