Using Dominances for Solving the Protein Family Identification Problem. - Noël Malod-Dognin; Mathilde Le Boudic-Jamin; Pritish Kamath; Rumen Andonov (WABI, 2011)

Parallel Seed-Based Approach to Protein Structure Similarity Detection. - Guillaume Chapuis; Mathilde Le Boudic-Jamin; Rumen Andonov; Hristo N. Djidjev; Dominique Lavenier (PPAM (2), 2013)

Exact Protein Structure Classification Using the Maximum Contact Map Overlap Metric. - Inken Wohlers; Mathilde Le Boudic-Jamin; Hristo N. Djidjev; Gunnar W. Klau; Rumen Andonov (AlCoB, 2014)

Automatic Classification of Protein Structure Using the Maximum Contact Map Overlap Metric. - Rumen Andonov; Hristo N. Djidjev; Gunnar W. Klau; Mathilde Le Boudic-Jamin; Inken Wohlers (Algorithms, 2015)

Parallel Seed-Based Approach to Multiple Protein Structure Similarities Detection. - Guillaume Chapuis; Mathilde Le Boudic-Jamin; Rumen Andonov; Hristo N. Djidjev; Dominique Lavenier (Sci. Program., 2015)

Similarités et divergences, globales et locales entre structures protéiques. (Global and Local Similarities and Divergences of Protein Structures ). - Mathilde Le Boudic-Jamin (2015)