High-fidelity discrete modeling of the HPA axis: a study of regulatory plasticity in biology. - Hooman Sedghamiz; Matthew C. Morris; Travis J. A. Craddock; L. Darrell Whitley; Gordon Broderick (BMC Syst. Biol., 2018)

When the How Outweighs the What: the Pivotal Importance of Context. - Cole A. Lyman; Connor Anderson 001; Matthew C. Morris; Umesh K. Nandal; Marianna J. Martindale; Mark J. Clement; Gordon Broderick (BIBM, 2019)

Predicting the Immune Response to Repurposed Drugs in Coronavirus-induced Cytokine Storm. - Matthew C. Morris; Cole A. Lyman; Spencer Richman; Hong Bao Cao; Chris Cheadle; Gordon Broderick (BIBE, 2020)

Hacking the Immune Response to Infection in Chronic Obstructive Pulmonary Disease. - Matthew C. Morris; Spencer Richman; Cole A. Lyman; Jun Qu; Manoj J. Mammen; Sanjay Sethi; Gordon Broderick (BIBE, 2020)

High Fidelity Modeling of Pulse Dynamics using Logic Networks. - Cole A. Lyman; Matthew C. Morris; Spencer Richman; Hong Bao Cao; Antony Scerri; Chris Cheadle; Gordon Broderick (BIBM, 2021)

Leveraging Drug-Target Interaction Data for the Translation of Computational Models into Clinically Actionable Interventions. - Spencer C. Richmanz; Cole A. Lyman; Matthew C. Morris; Hongbao Cao; Anastasia Nesterovay; Anton Yuryevy; Chris Cheadle; Gordon Broderick (BIBM, 2021)

Refinement of Biological Regulatory Graphs using Functional Enrichment. - Jeffrey M. Page; Matthew C. Morris; Gary R. Skuse; Gordon Broderick (BIBM, 2022)