Empirical scoring functions: I. The development of a fast empirical scoring function to estimate the binding affinity of ligands in receptor complexes. - Matthew D. Eldridge; Christopher W. Murray; Timothy R. Auton; Gaia Valeria Paolini; Roger P. Mee (J. Comput. Aided Mol. Des., 1997)

Empirical scoring functions. II. The testing of an empirical scoring function for the prediction of ligand-receptor binding affinities and the use of Bayesian regression to improve the quality of the model. - Christopher W. Murray; Timothy R. Auton; Matthew D. Eldridge (J. Comput. Aided Mol. Des., 1998)

Logical Tools for Quering and Assisting Annotation of a Biochemical Pathway Database. - Jacques van Helden; David R. Gilbert; Lorenz Wernisch; Renato Mancuso 002; Matthew D. Eldridge; Kirill Degtyarenko; Shoshana J. Wodak (German Conference on Bioinformatics, 1999)

From Molecular Activities and Processes to Biological Function. - Jacques van Helden; Avi Naim; Christian Lemer; Renato Mancuso 002; Matthew D. Eldridge; Shoshana J. Wodak (Briefings Bioinform., 2001)