CoRAL Accurately Resolves Extrachromosomal DNA Genome Structures with Long-Read Sequencing. - Kaiyuan Zhu; Matthew G. Jones; Jens Luebeck; Xinxin Bu; Hyerim Yi; King L. Hung; Ivy Tsz-Lo Wong; Shu Zhang 014; Paul S. Mischel; Howard Y. Chang; Vineet Bafna (RECOMB, 2024)

Tree Reconstruction Guarantees from CRISPR-Cas9 Lineage Tracing Data Using Neighbor-Joining. - Sebastian Prillo; Kevin An; Wilson Wu; Ivan Kristanto; Matthew G. Jones; Yun S. Song; Nir Yosef (RECOMB, 2025)