Human Immunodeficiency Virus Reverse Transcriptase and Protease Sequence Database. - Robert W. Shafer; Duane R. Jung; Bradley J. Betts; Yinong Xi; Matthew J. Gonzales (Nucleic Acids Res., 2000)

Human Immunodeficiency Virus Reverse Transcriptase and Protease Sequence Database: an expanded data model integrating natural language text and sequence analysis programs. - Rami Kantor; Rhoderick Machekano; Matthew J. Gonzales; Kathryn Dupnik; Jonathan M. Schapiro; Robert W. Shafer (Nucleic Acids Res., 2001)

Synonymous-non-synonymous mutation rates between sequences containing ambiguous nucleotides (Syn-SCAN). - Matthew J. Gonzales; Jonathan M. Dugan; Robert W. Shafer (Bioinform., 2002)

Human immunodeficiency virus reverse transcriptase and protease sequence database. - Soo-Yon Rhee; Matthew J. Gonzales; Rami Kantor; Bradley J. Betts; Jaideep Ravela; Robert W. Shafer (Nucleic Acids Res., 2003)

An atlas-based geometry pipeline for cardiac Hermite model construction and diffusion tensor reorientation. - Yongjie Zhang 001; Xinghua Liang; Jun Ma; Yiming Jing; Matthew J. Gonzales; Christopher T. Villongco; Adarsh Krishnamurthy; Lawrence R. Frank; Vishal Nigam; Paul Stark; Sanjiv M. Narayan; Andrew D. McCulloch (Medical Image Anal., 2012)

A three-dimensional finite element model of human atrial anatomy: New methods for cubic Hermite meshes with extraordinary vertices. - Matthew J. Gonzales; Gregory M. Sturgeon; Adarsh Krishnamurthy; Johan Hake; René Jonas; Paul Stark; Wouter-Jan Rappel; Sanjiv M. Narayan; Yongjie Zhang 001; William Paul Segars; Andrew D. McCulloch (Medical Image Anal., 2013)

Biomechanics simulations using cubic Hermite meshes with extraordinary nodes for isogeometric cardiac modeling. - Adarsh Krishnamurthy; Matthew J. Gonzales; Gregory M. Sturgeon; William Paul Segars; Andrew D. McCulloch (Comput. Aided Geom. Des., 2016)