ChimeraScan: a tool for identifying chimeric transcription in sequencing data. - Matthew K. Iyer; Arul M. Chinnaiyan; Christopher A. Maher (Bioinform., 2011)

Oculus: faster sequence alignment by streaming read compression. - Brendan A. Veeneman; Matthew K. Iyer; Arul M. Chinnaiyan (BMC Bioinform., 2012)