Modeling dichotomous item responses with free-knot splines. - Matthew S. Johnson (Comput. Stat. Data Anal., 2007)

Estimating cumulative incidence functions when the life distributions are constrained. - Hammou Elbarmi; Matthew S. Johnson; Hari Mukerjee (J. Multivar. Anal., 2010)

Two-Year Comparison of Airborne Measurements of CO2 and CH4 With GOSAT at Railroad Valley, Nevada. - Tomoaki Tanaka; Emma L. Yates; Laura T. Iraci; Matthew S. Johnson; Warren Gore; Jovan M. Tadic; Max Loewenstein; Akihiko Kuze; Christian Frankenberg; André Butz; Yukio Yoshida (IEEE Trans. Geosci. Remote. Sens., 2016)

Using PRMSE to evaluate automated scoring systems in the presence of label noise. - Anastassia Loukina; Nitin Madnani; Aoife Cahill; Lili Yao; Matthew S. Johnson; Brian Riordan 001; Daniel F. McCaffrey (BEA@ACL, 2020)

Reaction Mechanism Generator v3.0: Advances in Automatic Mechanism Generation. - Mengjie Liu; Alon Grinberg Dana; Matthew S. Johnson; Mark J. Goldman; Agnes Jocher; A. Mark Payne; Colin A. Grambow; Kehang Han; Nathan W. Yee; Emily J. Mazeau; Katrin Blondal; Richard H. West; et al. (J. Chem. Inf. Model., 2021)

RMG Database for Chemical Property Prediction. - Matthew S. Johnson; Xiaorui Dong; Alon Grinberg Dana; Yunsie Chung; David Farina; Ryan J. Gillis; Mengjie Liu; Nathan W. Yee; Katrin Blondal; Emily J. Mazeau; Colin A. Grambow; A. Mark Payne; et al. (J. Chem. Inf. Model., 2022)

Pynta─An Automated Workflow for Calculation of Surface and Gas-Surface Kinetics. - Matthew S. Johnson; Maciej Gierada; Eric D. Hermes; David H. Bross; Khachik Sargsyan; Habib N. Najm; Judit Zádor (J. Chem. Inf. Model., 2023)

Large-Scale Assessments for Learning: A Human-Centred AI Approach to Contextualizing Test Performance. - Hongwen Guo; Matthew S. Johnson; Kadriye Ercikan; Luis Saldivia; Michelle Worthington (J. Learn. Anal., 2024)

Validity Arguments For Constructed Response Scoring Using Generative Artificial Intelligence Applications. - Jodi M. Casabianca; Daniel F. McCaffrey; Matthew S. Johnson; Naim Alper; Vladimir Zubenko (CoRR, 2025)