Compactification of information in r-color 2-dimensional rectangular patterns. - Matthew Witten (Pattern Recognit., 1978)

Neural Orchestration: From Cortical Simulation to Cortical Symphony. - Matthew Witten; Robert E. Wyatt (USENIX Summer, 1991)

A bibliography on computational algorithms in molecular biology and genetics. - Sarah Barron; Matthew Witten; R. Harkness; J. Driver (Comput. Appl. Biosci., 1991)

Editorial - the Frankenstein Project: Building a Man in the Machine and the Arrival of the Computational Physician. - Matthew Witten (Int. J. High Perform. Comput. Appl., 1992)

Increasing Our Understanding of Biological Models Through Visual and Sonic Representations: a Cortical Case Study. - Matthew Witten; Robert E. Wyatt (Int. J. High Perform. Comput. Appl., 1992)

The role of high performance computing in medicine and public health. - Matthew Witten (Future Gener. Comput. Syst., 1994)

A memetic algorithm for dosimetric optimization in CyberKnife robotic radiosurgical treatment planning. - Owen Clancey; Matthew Witten (IEEE Congress on Evolutionary Computation, 2011)

Feasibility of an Ant Colony Optimization Algorithm for Multi-leaf Collimator (MLC) Aperture Definition and Beam Weighting in Volumetric Modulated Arc Therapy (VMAT) Radiotherapy Treatment Planning. - Owen Clancey; Matthew Witten (ANTS, 2012)

An evolutionary algorithm for optimization of affine transformation parameters for dose matrix warping in patient-specific quality assurance of radiotherapy dose distributions. - Matthew Witten; Owen Clancey (IEEE Congress on Evolutionary Computation, 2012)

An evolutionary algorithm for the optimization of parameters in radiation beam profile modeling for the CyberKnife X-band linear accelerator. - Matthew Witten; Owen Clancey (IEEE Congress on Evolutionary Computation, 2013)

A mimetic algorithm for simultaneous multileaf collimator aperture shape and dosimetric optimization in CyberKnife robotic radiosurgery. - Matthew R. Witten; Owen C. Clancey (CEC, 2015)

Residual dose deviation differential histogram analysis using evolutionary-optimized transform parameters for dose distribution warping in patient-specific quality assurance in external beam radiation therapy. - Matthew Witten; Owen Clancey (CEC, 2017)

Evolutionary Optimization in Robotic Radiotherapy Treatment Planning: A Comparison of Clinical Results with L-BFGS Optimization. - Matthew Witten; Owen Clancey (CEC, 2018)

Feasibility of Genetic Programming for the Optimization of Tissue-Type-Segmented Maps in the Generation of Synthetic CT in Radiation Therapy Treatment Planning. - Matthew Witten; Owen Clancey (CEC, 2020)

The Effect of Mask Usage on Viral Immune Escape Times: An Evolutionary Strategies-Inspired Model. - Matthew Witten; Owen Clancey (CEC, 2021)

Vaccination Rates and the Emergence of Viral Variants: An Evolutionary Strategies-Inspired Model. - Matthew Witten; Owen Clancey (CEC, 2022)