qPIPSA: Relating enzymatic kinetic parameters and interaction fields. - Razif R. Gabdoulline; Matthias Stein; Rebecca C. Wade (BMC Bioinform., 2007)

SYCAMORE - a systems biology computational analysis and modeling research environment. - Andreas Weidemann; Stefan Richter 002; Matthias Stein; Sven Sahle; Ralph Gauges; Razif R. Gabdoulline; Irina Surovtsova; Nils Semmelrock; Bruno Besson; Isabel Rojas; Rebecca C. Wade; Ursula Kummer (Bioinform., 2008)

webPIPSA: a web server for the comparison of protein interaction properties. - Stefan Richter 002; Anne Wenzel; Matthias Stein; Razif R. Gabdoulline; Rebecca C. Wade (Nucleic Acids Res., 2008)

Bayesian approach for inconsistent information. - Matthias Stein; Michael Beer; Vladik Kreinovich (Inf. Sci., 2013)

Verified stochastic methods. - Gabor Rebner; Michael Beer; Ekaterina Auer; Matthias Stein (Soft Comput., 2013)

The Molecular Basis of Polyunsaturated Fatty Acid Interactions with the Shaker Voltage-Gated Potassium Channel. - Samira Yazdi; Matthias Stein; Fredrik Elinder; Magnus Andersson; Erik Lindahl (PLoS Comput. Biol., 2016)

Geoinformationssysteme mit Sprache steuern - eine erste Evaluation. - Matthias Stein; Morin Ostkamp; Andreas Wytzisk (MuC (Workshopband), 2018)

Accurate lattice energies of organic molecular crystals from periodic turbomole calculations. - Hannes Konrad Buchholz; Matthias Stein (J. Comput. Chem., 2018)

Structural Investigation of the Dopamine-2 Receptor Agonist Bromocriptine Binding to Dimeric D2HighR and D2LowR States. - Ramin Ekhteiari Salmas; Philip Seeman; Matthias Stein; Serdar Durdagi (J. Chem. Inf. Model., 2018)

Reduced basis method for the nonlinear Poisson-Boltzmann equation regularized by the range-separated canonical tensor format. - Cleophas Kweyu; Lihong Feng; Matthias Stein; Peter Benner (CoRR, 2021)

Regularization of Poisson-Boltzmann Type Equations with Singular Source Terms Using the Range-Separated Tensor Format. - Peter Benner; Venera Khoromskaia; Boris N. Khoromskij; Cleophas Kweyu; Matthias Stein (SIAM J. Sci. Comput., 2021)

Structural Dynamics of Lys11-Selective Deubiquitinylase Cezanne-1 during the Catalytic Cycle. - Metehan Ilter; Eric Schulze-Niemand; Michael Naumann; Matthias Stein (J. Chem. Inf. Model., 2023)

Activation and Reactivity of the Deubiquitinylase OTU Cezanne-2 from MD Simulations and QM/MM Calculations. - Metehan Ilter; Andrés M. Escorcia; Eric Schulze-Niemand; Michael Naumann; Matthias Stein (J. Chem. Inf. Model., 2025)

Solution Decomposition for the Nonlinear Poisson-Boltzmann Equation Using the Range-Separated Tensor Format. - Cleophas Kweyu; Venera Khoromskaia; Boris N. Khoromskij; Matthias Stein; Peter Benner (SIAM J. Sci. Comput., 2025)