T-cell epitope prediction based on self-tolerance. - Nora C. Toussaint; Magdalena Feldhahn; Matthias Ziehm; Stefan Stevanovic; Oliver Kohlbacher (BCB, 2011)

POPISK: T-cell reactivity prediction using support vector machines and string kernels. - Chun-Wei Tung; Matthias Ziehm; Andreas Kämper; Oliver Kohlbacher; Shinn-Ying Ho (BMC Bioinform., 2011)

SurvCurv database and online survival analysis platform update. - Matthias Ziehm; Dobril K. Ivanov; Aditi Bhat; Linda Partridge; Janet M. Thornton (Bioinform., 2015)

Neuroblastoma signalling models unveil combination therapies targeting feedback-mediated resistance. - Mathurin Dorel; Bertram Klinger; Tommaso Mari; Joern Toedling; Eric Blanc; Clemens Messerschmidt; Michal Nadler-Holly; Matthias Ziehm; Anja Sieber; Falk Hertwig; Dieter Beule; Angelika Eggert; et al. (PLoS Comput. Biol., 2021)