Ensuring service backwards compatibility with Generic Web Services. - Vadym Borovskiy; Juergen Mueller; Matthieu-Patrick Schapranow; Alexander Zeier (PESOS@ICSE, 2009)

Data Loading and Caching Strategies in Service-Oriented Enterprise Applications. - Matthieu-P. Schapranow; Jens Krüger 003; Vadym Borovskiy; Alexander Zeier; Hasso Plattner (SERVICES I, 2009)

RFID Event Data Processing: An Architecture for Storing and Searching. - Matthieu-P. Schapranow; Jürgen Müller 003; Alexander Zeier; Hasso Plattner (IWRT, 2010)

Enabling real-time charging for smart grid infrastructures using in-memory databases. - Matthieu-P. Schapranow; Ralph Kühne; Alexander Zeier; Hasso Plattner (LCN, 2010)

A Dynamic Mutual RFID Authentication Model Preventing Unauthorized Third Party Access. - Matthieu-P. Schapranow; Alexander Zeier; Hasso Plattner (NSS, 2010)

Security Extensions for Improving Data Security of Event Repositories in EPCglobal Networks. - Matthieu-P. Schapranow; Alexander Zeier; Hasso Plattner (EUC, 2011)

A Formal Model for Enabling RFID in Pharmaceutical Supply Chains. - Matthieu-P. Schapranow; Alexander Zeier; Hasso Plattner (HICSS, 2011)

Costs of authentic pharmaceuticals: research on qualitative and quantitative aspects of enabling anti-counterfeiting in RFID-aided supply chains. - Matthieu-P. Schapranow; Jürgen Müller 003; Alexander Zeier; Hasso Plattner (Pers. Ubiquitous Comput., 2012)

HIG - An in-memory database platform enabling real-time analyses of genome data. - Matthieu-P. Schapranow; Hasso Plattner (IEEE BigData, 2013)

Towards integrating the detection of genetic variants into an in-memory database. - Cindy Fähnrich; Matthieu-P. Schapranow; Hasso Plattner (IEEE BigData, 2014)

Applying In-Memory Technology for Automatic Template Filling in the Clinical Domain. - Konrad Herbst; Cindy Fähnrich; Mariana L. Neves; Matthieu-P. Schapranow (CLEF (Working Notes), 2014)

In-memory technology enables interactive drug response analysis. - Matthieu-P. Schapranow; Konrad Klinghammer; Cindy Fähnrich; Hasso Plattner (Healthcom, 2014)

Real-time security extensions for EPCglobal networks: case study for the pharmaceutical industry. - Matthieu-Patrick Schapranow (Springer, 2014)

The Medical Knowledge Cockpit: Real-time analysis of big medical data enabling precision medicine. - Matthieu-P. Schapranow; Milena Kraus; Cindy Perscheid; Cornelius Bock; Franz Liedke; Hasso Plattner (BIBM, 2015)

A Federated In-memory Database System for Life Sciences. - Matthieu-P. Schapranow; Cindy Perscheid; Alf Wachsmann; Martin Siegert; Cornelius Bock; Friedrich Horschig; Franz Liedke; Janos Brauer; Hasso Plattner (BIRTE (Revised Selected Papers), 2015)

Facing the genome data deluge: efficiently identifying genetic variants with in-memory database technology. - Cindy Fähnrich; Matthieu-P. Schapranow; Hasso Plattner (SAC, 2015)

IMDBfs: Bridging the gap between in-memory database technology and file-based tools for life sciences. - Matthieu-P. Schapranow; Milena Kraus; Marius Danner; Hasso Plattner (BIBM, 2016)

Towards an integrated health research process: A cloud-based approach. - Matthieu-P. Schapranow; Matthias Uflacker; Murat Sariyar; Sebastian C. Semler; Johannes Klaus Fichte; Dietmar Schielke; Kismet Ekinci; Thomas Zahn (IEEE BigData, 2016)

DEAME - Differential Expression Analysis Made Easy. - Milena Kraus; Guenter Hesse; Tamara Slosarek; Marius Danner; Ajay Kesar; Akshay Bhushan; Matthieu-P. Schapranow (Poly/DMAH@VLDB, 2018)

External Validation of a "Black-Box" Clinical Predictive Model in Nephrology: Can Interpretability Methods Help Illuminate Performance Differences? - Harry Freitas Da Cruz; Boris Pfahringer; Frederic Schneider; Alexander Meyer; Matthieu-P. Schapranow (AIME, 2019)

MORPHER - A Platform to Support Modeling of Outcome and Risk Prediction in Health Research. - Harry Freitas Da Cruz; Benjamin Bergner; Orhan Konak; Frederic Schneider; Philipp Bode; Conrad Lempert; Matthieu-P. Schapranow (BIBE, 2019)

Prediction of Acute Kidney Injury in Cardiac Surgery Patients: Interpretation using Local Interpretable Model-agnostic Explanations. - Harry Freitas Da Cruz; Frederic Schneider; Matthieu-P. Schapranow (HEALTHINF, 2019)

An Information and Communication Platform Supporting Analytics for Elderly Care. - Orhan Konak; Harry Freitas Da Cruz; Marvin Thiele; David Golla; Matthieu-P. Schapranow (ICT4AWE, 2019)

Qualitative Comparison of Selected Indel Detection Methods for RNA-Seq Data. - Tamara Slosarek; Milena Kraus; Matthieu-P. Schapranow; Erwin P. Böttinger (IWBBIO (1), 2019)

GGPONC: A Corpus of German Medical Text with Rich Metadata Based on Clinical Practice Guidelines. - Florian Borchert; Christina Lohr; Luise Modersohn; Thomas Langer; Markus Follmann; Jan-Philipp Sachs; Udo Hahn; Matthieu-P. Schapranow (LOUHI@EMNLP, 2020)

Controversial Trials First: Identifying Disagreement Between Clinical Guidelines and New Evidence. - Florian Borchert; Laura Meister; Thomas Langer; Markus Follmann; Bert Arnrich; Matthieu-P. Schapranow (AMIA, 2021)

A Comparison of Concept Embeddings for German Clinical Corpora. - Aadil Rasheed; Florian Borchert; Lasse Kohlmeyer; Richard Henkenjohann; Matthieu-P. Schapranow (BIBM, 2021)

An Engineering Approach Towards Multi-site Virtual Molecular Tumor Board Software. - Richard Henkenjohann; Benjamin Bergner; Florian Borchert; Nina Bougatf; Hauke Hund; Roland Eils; Matthieu-P. Schapranow (IHAW, 2021)

Using interpretability approaches to update "black-box" clinical prediction models: an external validation study in nephrology. - Harry Freitas Da Cruz; Boris Pfahringer; Tom Martensen; Frederic Schneider; Alexander Meyer; Erwin P. Böttinger; Matthieu-P. Schapranow (Artif. Intell. Medicine, 2021)

Knowledge bases and software support for variant interpretation in precision oncology. - Florian Borchert; Andreas Mock; Aurelie Tomczak; Jonas Hügel; Samer Alkarkoukly; Alexander Knurr; Anna-Lena Volckmar; Albrecht Stenzinger; Peter Schirmacher; Jürgen Debus; Dirk Jäger; Thomas Longerich; et al. (Briefings Bioinform., 2021)

HPI-DHC @ BioASQ DisTEMIST: Spanish Biomedical Entity Linking with Pre-trained Transformers and Cross-lingual Candidate Retrieval. - Florian Borchert; Matthieu-P. Schapranow (CLEF (Working Notes), 2022)

GGPONC 2.0 - The German Clinical Guideline Corpus for Oncology: Curation Workflow, Annotation Policy, Baseline NER Taggers. - Florian Borchert; Christina Lohr; Luise Modersohn; Jonas Witt; Thomas Langer; Markus Follmann; Matthias Gietzelt; Bert Arnrich; Udo Hahn; Matthieu-P. Schapranow (LREC, 2022)

A Meta-dataset of German Medical Corpora: Harmonization of Annotations and Cross-corpus NER Evaluation. - Ignacio Llorca; Florian Borchert; Matthieu-P. Schapranow (ClinicalNLP@ACL, 2023)

GGTWEAK: Gene Tagging with Weak Supervision for German Clinical Text. - Sandro Steinwand; Florian Borchert; Silvia Winkler; Matthieu-P. Schapranow (AIME, 2023)

Resolving Elliptical Compounds in German Medical Text. - Niklas Kammer; Florian Borchert; Silvia Winkler; Gerard de Melo; Matthieu-P. Schapranow (BioNLP@ACL, 2023)

Cross-Lingual Candidate Retrieval and Re-ranking for Biomedical Entity Linking. - Florian Borchert; Ignacio Llorca; Matthieu-P. Schapranow (CLEF, 2023)

HPIDHC at NTCIR-17 MedNLP-SC: Data Augmentation and Ensemble Learning for Multilingual Adverse Drug Event Detection. - Smilla Fox; Martin Preiß; Florian Borchert; Aadil Rasheed; Matthieu-P. Schapranow (NTCIR, 2023)

xMEN: A Modular Toolkit for Cross-Lingual Medical Entity Normalization. - Florian Borchert; Ignacio Llorca; Roland Roller; Bert Arnrich; Matthieu-P. Schapranow (CoRR, 2023)

Software-Tool Support for Collaborative, Virtual, Multi-Site Molecular Tumor Boards. - Matthieu-P. Schapranow; Florian Borchert; Nina Bougatf; Hauke Hund; Roland Eils (SN Comput. Sci., 2023)

Improving biomedical entity linking for complex entity mentions with LLM-based text simplification. - Florian Borchert; Ignacio Llorca; Matthieu-P. Schapranow (Database J. Biol. Databases Curation, 2024)

High-precision information retrieval for rapid clinical guideline updates. - Florian Borchert; Paul Wullenweber; Annika Oeser; Nina Kreuzberger; Torsten Karge; Thomas Langer; Nicole Skoetz; Lothar H. Wieler; Matthieu-P. Schapranow; Bert Arnrich (npj Digit. Medicine, 2025)