Software Feature Request Detection in Issue Tracking Systems. - Thorsten Merten; Matús Falis; Paul Hübner; Thomas Quirchmayr; Simone Bürsner; Barbara Paech (RE, 2016)

Ontological attention ensembles for capturing semantic concepts in ICD code prediction from clinical text. - Matús Falis; Maciej Pajak; Aneta Lisowska; Patrick Schrempf; Lucas Deckers; Shadia Mikhael; Sotirios A. Tsaftaris; Alison O'Neil (LOUHI@EMNLP, 2019)

Language Transfer for Early Warning of Epidemics from Social Media. - Mattias Appelgren; Patrick Schrempf; Matús Falis; Satoshi Ikeda; Alison Q. O'Neil (CoRR, 2019)

Paying Per-Label Attention for Multi-label Extraction from Radiology Reports. - Patrick Schrempf; Hannah Watson; Shadia Mikhael; Maciej Pajak; Matús Falis; Aneta Lisowska; Keith W. Muir; David Harris-Birtill; Alison Q. O'Neil (iMIMIC/MIL3ID/LABELS@MICCAI, 2020)

CoPHE: A Count-Preserving Hierarchical Evaluation Metric in Large-Scale Multi-Label Text Classification. - Matús Falis; Hang Dong 002; Alexandra Birch; Beatrice Alex (EMNLP (1), 2021)

Horses to Zebras: Ontology-Guided Data Augmentation and Synthesis for ICD-9 Coding. - Matús Falis; Hang Dong 002; Alexandra Birch; Beatrice Alex (BioNLP@ACL, 2022)

Automated Clinical Coding: What, Why, and Where We Are? - Hang Dong 002; Matús Falis; William Whiteley; Beatrice Alex; Shaoxiong Ji; Jiaoyan Chen 001; Honghan Wu (CoRR, 2022)

Automated clinical coding: what, why, and where we are? - Hang Dong 002; Matús Falis; William Whiteley; Beatrice Alex; Joshua Matterson; Shaoxiong Ji; Jiaoyan Chen 001; Honghan Wu (npj Digit. Medicine, 2022)

Can GPT-3.5 generate and code discharge summaries? - Matús Falis; Aryo Pradipta Gema; Hang Dong 002; Luke Daines; Siddharth Basetti; Michael Holder; Rose S. Penfold; Alexandra Birch; Beatrice Alex (J. Am. Medical Informatics Assoc., 2024)

Privacy-Aware, Public-Aligned: Embedding Risk Detection and Public Values into Scalable Clinical Text De-Identification for Trusted Research Environments. - Arlene Casey; Stuart Dunbar; Franz Gruber; Samuel McInerney; Matús Falis; Pamela Linksted; Katie Wilde; Kathy Harrison; Alison Hamilton; Christian Cole (CoRR, 2025)