MASQOT: a method for cDNA microarray spot quality control. - Max Bylesjö; Daniel Eriksson; Andreas Sjödin; Michael Sjöström; Stefan Jansson; Henrik Antti; Johan Trygg (BMC Bioinform., 2005)

MASQOT-GUI: spot quality assessment for the two-channel microarray platform. - Max Bylesjö; Andreas Sjödin; Daniel Eriksson; Henrik Antti; Thomas Moritz; Stefan Jansson; Johan Trygg (Bioinform., 2006)

Orthogonal projections to latent structures as a strategy for microarray data normalization. - Max Bylesjö; Daniel Eriksson; Andreas Sjödin; Stefan Jansson; Thomas Moritz; Johan Trygg (BMC Bioinform., 2007)

A Multivariate Approach to Investigate Docking Parameters' Effects on Docking Performance. - C. David Andersson; Elin Thysell; Anton Lindström; Max Bylesjö; Florian Raubacher; Anna Linusson (J. Chem. Inf. Model., 2007)

K-OPLS package: Kernel-based orthogonal projections to latent structures for prediction and interpretation in feature space. - Max Bylesjö; Mattias Rantalainen; Jeremy K. Nicholson; Elaine Holmes; Johan Trygg (BMC Bioinform., 2008)