cutPrimers: A New Tool for Accurate Cutting of Primers from Reads of Targeted Next Generation Sequencing. - Andrey Kechin; Uljana Boyarskikh; Alexander E. Kel; Maxim Filipenko (J. Comput. Biol., 2017)

BRCA-analyzer: Automatic workflow for processing NGS reads of BRCA1 and BRCA2 genes. - Andrey Kechin; Evgeniy Khrapov; Uljana Boyarskikh; Alexander E. Kel; Maxim Filipenko (Comput. Biol. Chem., 2018)

Walking pathways with positive feedback loops reveal DNA methylation biomarkers of colorectal cancer. - Alexander E. Kel; Ulyana Boyarskikh; Philip Stegmaier; Leonid S. Leskov; Andrey V. Sokolov; Ivan S. Yevshin; Nikita Mandrik; Daria Stelmashenko; Jeannette Koschmann; Olga V. Kel-Margoulis; Mathias Krull; Anna Martínez-Cardús; et al. (BMC Bioinform., 2019)

NGS-PrimerPlex: High-throughput primer design for multiplex polymerase chain reactions. - Andrey Kechin; Viktoria Borobova; Ulyana Boyarskikh; Evgeniy Khrapov; Sergey Subbotin 003; Maxim Filipenko (PLoS Comput. Biol., 2020)