Metagenomic analysis: the challenge of the data bonanza. - Chris I. Hunter; Alex L. Mitchell; Philip Jones; Craig McAnulla; Sebastien Pesseat; Maxim Scheremetjew; Sarah Hunter (Briefings Bioinform., 2012)

InterPro in 2011: new developments in the family and domain prediction database. - Sarah Hunter; Philip Jones; Alex L. Mitchell; Rolf Apweiler; Teresa K. Attwood; Alex Bateman; Thomas Bernard; David Binns; Peer Bork; Sarah W. Burge; Edouard De Castro; Penny C. Coggill; et al. (Nucleic Acids Res., 2012)

InterProScan 5: genome-scale protein function classification. - Philip Jones; David Binns; Hsin-Yu Chang; Matthew Fraser; Weizhong Li 001; Craig McAnulla; Hamish McWilliam; John Maslen; Alex L. Mitchell; Gift Nuka; Sebastien Pesseat; Antony F. Quinn; et al. (Bioinform., 2014)

EBI metagenomics - a new resource for the analysis and archiving of metagenomic data. - Sarah Hunter; Matthew Corbett; Hubert Denise; Matthew Fraser; Alejandra N. González-Beltrán; Christopher I. Hunter; Philip Jones; Rasko Leinonen; Craig McAnulla; Eamonn Maguire; John Maslen; Alex L. Mitchell; et al. (Nucleic Acids Res., 2014)

The InterPro protein families database: the classification resource after 15 years. - Alex L. Mitchell; Hsin-Yu Chang; Louise C. Daugherty; Matthew Fraser; Sarah Hunter; Rodrigo Lopez; Craig McAnulla; Conor McMenamin; Gift Nuka; Sebastien Pesseat; Amaia Sangrador-Vegas; Maxim Scheremetjew; et al. (Nucleic Acids Res., 2015)

Slim-o-matic: a Semi-Automated Way to Generate Gene Ontology Slims. - Mélanie Courtot; Alex L. Mitchell; Maxim Scheremetjew; Janet Piñero González; Laura I. Furlong; Robert D. Finn; Helen E. Parkinson (SWAT4LS, 2016)

EBI metagenomics in 2016 - an expanding and evolving resource for the analysis and archiving of metagenomic data. - Alex L. Mitchell; François Bucchini; Guy Cochrane; Hubert Denise; Petra ten Hoopen; Matthew Fraser; Sebastien Pesseat; Simon C. Potter; Maxim Scheremetjew; Peter Sterk; Robert D. Finn (Nucleic Acids Res., 2016)

EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies. - Alex L. Mitchell; Maxim Scheremetjew; Hubert Denise; Simon C. Potter; Aleksandra Tarkowska; Matloob Qureshi; Gustavo A. Salazar; Sebastien Pesseat; Miguel A. Boland; Fiona M. I. Hunter; Petra ten Hoopen; Blaise T. F. Alako; et al. (Nucleic Acids Res., 2018)

MGnify: the microbiome analysis resource in 2020. - Alex L. Mitchell; Alexandre Almeida; Martin Beracochea; Miguel A. Boland; Josephine Burgin; Guy Cochrane; Michael R. Crusoe; Varsha Kale; Simon C. Potter; Lorna J. Richardson; Ekaterina A. Sakharova; Maxim Scheremetjew; et al. (Nucleic Acids Res., 2020)

deTELpy: Python package for high-throughput detection of amino acid substitutions in mass spectrometry datasets. - Cedric Landerer; Maxim Scheremetjew; HongKee Moon; Lena Hersemann; Ágnes Tóth-Petróczy (Bioinform., 2024)