Integration of Domain Knowledge using Medical Knowledge Graph Deep Learning for Cancer Phenotyping. - Mohammed M. Alawad; Shang Gao 008; Mayanka Chandra Shekar; S. M. Shamimul Hasan; James Blair Christian; Xiao-Cheng Wu; Eric B. Durbin; Jennifer A. Doherty; Antoinette Stroup; Linda Coyle; Lynne Penberthy; Georgia D. Tourassi (CoRR, 2021)

Language models for the prediction of SARS-CoV-2 inhibitors. - Andrew E. Blanchard; John Gounley; Debsindhu Bhowmik; Mayanka Chandra Shekar; Isaac Lyngaas; Shang Gao 008; Junqi Yin; Aristeidis Tsaris; Feiyi Wang; Jens Glaser (Int. J. High Perform. Comput. Appl., 2022)

In with the old, in with the new: machine learning for time to event biomedical research. - Ioana Danciu; Greeshma A. Agasthya; Janet P. Tate; Mayanka Chandra Shekar; Ian Goethert; Olga Ovchinnikova; Benjamin H. McMahon; Amy C. Justice (J. Am. Medical Informatics Assoc., 2022)

Automating Genetic Algorithm Mutations for Molecules Using a Masked Language Model. - Andrew E. Blanchard; Mayanka Chandra Shekar; Shang Gao 008; John Gounley; Isaac Lyngaas; Jens Glaser; Debsindhu Bhowmik (IEEE Trans. Evol. Comput., 2022)

Characterizing Quantum Classifier Utility in Natural Language Processing Workflows. - Kathleen E. Hamilton; Mayanka Chandra Shekar; John Gounley; Dhanvi Bharadwaj; Prasanna Date; Eduardo Antonio Coello Pérez; In-Saeng Suh; Georgia D. Tourassi (QCE, 2023)

Ultra-Long Sequence Distributed Transformer. - Xiao Wang 004; Isaac Lyngaas; Aristeidis Tsaris; Peng Chen 035; Sajal Dash; Mayanka Chandra Shekar; Tao Luo 014; Hong-Jun Yoon; Mohamed Wahib; John Gounley (CoRR, 2023)

FrESCO: Framework for Exploring Scalable Computational Oncology. - Adam Spannaus; John Gounley; Mayanka Chandra Shekar; Zachary R. Fox; Jamaludin Mohd-Yusof; Noah Schaefferkoetter; Heidi A. Hanson (J. Open Source Softw., 2023)

Adiabatic Quantum Support Vector Machines. - Prasanna Date; Dong Jun Woun; Kathleen E. Hamilton; Eduardo Antonio Coello Pérez; Mayanka Chandra Shekar; Francisco Rios; John Gounley; In-Saeng Suh; Travis S. Humble; Georgia D. Tourassi (CoRR, 2024)

VISION: Toward a Standardized Process for Radiology Image Management at the National Level. - Kathryn Knight; Ioana Danciu; Olga Ovchinnikova; Jacob D. Hinkle; Mayanka Chandra Shekar; Debangshu Mukherjee; Eileen McAllister; Caitlin Rizy; Kelly Cho; Amy C. Justice; Joseph Erdos; Peter Kuzmak; et al. (CoRR, 2024)