CRISPRpred(SEQ): a sequence-based method for sgRNA on target activity prediction using traditional machine learning. - Ali Haisam Muhammad Rafid; Md. Toufikuzzaman; Mohammad Saifur Rahman 001; M. Sohel Rahman (BMC Bioinform., 2020)

Phylogenetic Analyses of SARS-CoV-2 Strains Reveal Its Link to the Spread of COVID-19 Across the Globe. - Shashata Sawmya; Arpita Saha; Sadia Tasnim; Naser Anjum Samudro; Md. Toufikuzzaman; Ali Haisam Muhammad Rafid; Mohammad Saifur Rahman 001; M. Sohel Rahman; Tanvir Alam (MedInfo, 2021)

A Deep Learning Based Semi-Supervised Network Intrusion Detection System Robust to Adversarial Attacks. - Syed Md. Mukit Rashid; Md. Toufikuzzaman; Md. Shohrab Hossain (NSysS, 2023)

CRISPR-DIPOFF: an interpretable deep learning approach for CRISPR Cas-9 off-target prediction. - Md. Toufikuzzaman; Md. Abul Hassan Samee; M. Sohel Rahman (Briefings Bioinform., 2024)

From Control to Chaos: A Comprehensive Formal Analysis of 5G's Access Control. - Mujtahid Akon; Md. Toufikuzzaman; Syed Rafiul Hussain (SP, 2025)

A light-weight model to generate NDWI from Sentinel-1. - Saleh Sakib Ahmed; Saifur Rahman Jony; Md. Toufikuzzaman; Saifullah Sayed; Rashed Uz Zzaman; Sara Nowreen; M. Sohel Rahman (CoRR, 2025)