A mechanistic pan-cancer pathway model informed by multi-omics data interprets stochastic cell fate responses to drugs and mitogens. - Mehdi Bouhaddou; Anne Marie Barrette; Alan D. Stern; Rick J. Koch; Matthew S. DiStefano; Eric A. Riesel; Luis C. Santos; Annie L. Tan; Alex E. Mertz; Marc R. Birtwistle (PLoS Comput. Biol., 2018)

PhosNetVis: A web-based tool for fast kinase-substrate enrichment analysis and interactive 2D/3D network visualizations of phosphoproteomics data. - Osho Rawal; Berk Turhan; Irene Font Peradejordi; Shreya Chandrasekar; Selim Kalayci; Sacha Gnjatic; Jeffrey Johnson; Mehdi Bouhaddou; Zeynep H. Gümüs (Patterns, 2025)