Intricate Knots in Proteins: Function and Evolution. - Peter Virnau; Leonid A. Mirny; Mehran Kardar (PLoS Comput. Biol., 2006)

Protein knot server: detection of knots in protein structures. - Grigory Kolesov; Peter Virnau; Mehran Kardar; Leonid A. Mirny (Nucleic Acids Res., 2007)

A Stevedore's Protein Knot. - Daniel Bölinger; Joanna I. Sulkowska; Hsiao-Ping Hsu; Leonid A. Mirny; Mehran Kardar; José N. Onuchic; Peter Virnau (PLoS Comput. Biol., 2010)

Quantitative Model for Efficient Temporal Targeting of Tumor Cells and Neovasculature. - Mohammad Kohandel; Christoph A. Haselwandter; Mehran Kardar; Shiladitya Sengupta; Sivabal Sivaloganathan (Comput. Math. Methods Medicine, 2011)