Statistical analysis of GC-biased gene conversion and recombination hotspots in eukaryotic genomes: a phylogenetic hidden Markov model-based approach. - Meijun Gao; Kevin J. Liu (BCB, 2021)

The impact of gene sequence alignment and gene tree estimation error on summary-based species network estimation. - Meijun Gao; Wei Wang 337; Kevin J. Liu (BCB, 2022)

DAMO: Decoding by Accumulating Activations Momentum for Mitigating Hallucinations in Vision-Language Models. - Kaishen Wang; Hengrui Gu 002; Meijun Gao; Kaixiong Zhou (ICLR, 2025)

Layer-Level Self-Exposure and Patch: Affirmative Token Mitigation for Jailbreak Attack Defense. - Yang Ouyang; Hengrui Gu 002; Shuhang Lin; Wenyue Hua; Jie Peng 002; Bhavya Kailkhura; Meijun Gao; Tianlong Chen 001; Kaixiong Zhou (NAACL (Long Papers), 2025)

Detecting and Mapping Local Model Violations During Biomolecular Sequence Analysis: a REsampling and Visual EvALuation Approach. - Meijun Gao; Kevin J. Liu (RECOMB-CG, 2025)