NIMROD: A program for inference via a normal approximation of the posterior in models with random effects based on ordinary differential equations. - Mélanie Prague; Daniel Commenges; Jérémie Guedj; Julia Drylewicz; Rodolphe Thiébaut (Comput. Methods Programs Biomed., 2013)

Erratum to "NIMROD: A program for inference via normal approximation of the posterior in models with random effects based on ordinary differential equations" [Comput. Methods Programs Biomed. 111 (2) (2013) 447-458]. - Mélanie Prague; Daniel Commenges; Jérémie Guedj; Julia Drylewicz; Rodolphe Thiébaut (Comput. Methods Programs Biomed., 2014)

Quantifying and Predicting the Effect of Exogenous Interleukin-7 on CD4+T Cells in HIV-1 Infection. - Rodolphe Thiébaut; Julia Drylewicz; Mélanie Prague; Christine Lacabaratz; Stéphanie Beq; Ana Jarne; Thérèse Croughs; Rafick-Pierre Sekaly; Michael M. Lederman; Irini Sereti; Daniel Commenges; Yves Lévy (PLoS Comput. Biol., 2014)

Population modelling by examples ii. - Robert J. Smith?; Bruce Y. Lee; Aristides Moustakas; Andreas Zeigler; Mélanie Prague; Romualdo Santos; Matthias Chung; Robin Gras; Valery Forbes; Sixten Borg; Tracy Comans; Yifei Ma; et al. (SummerSim, 2016)

CRTgeeDR: an R Package for Doubly Robust Generalized Estimating Equations Estimations in Cluster Randomized Trials with Missing Data. - Mélanie Prague; Rui Wang; Victor De Gruttola (R J., 2017)

EpidemiOptim: A Toolbox for the Optimization of Control Policies in Epidemiological Models. - Cédric Colas; Boris P. Hejblum; Sébastien Rouillon; Rodolphe Thiébaut; Pierre-Yves Oudeyer; Clément Moulin-Frier; Mélanie Prague (J. Artif. Intell. Res., 2021)

Robust and Efficient Optimization Using a Marquardt-Levenberg Algorithm with R Package marqLevAlg. - Viviane Philipps; Boris P. Hejblum; Mélanie Prague; Daniel Commenges; Cécile Proust-Lima (R J., 2021)

Modeling the kinetics of the neutralizing antibody response against SARS-CoV-2 variants after several administrations of Bnt162b2. - Quentin Clairon; Mélanie Prague; Delphine Planas; Timothée Bruel; Laurent Hocqueloux; Thierry Prazuck; Olivier Schwartz; Rodolphe Thiébaut; Jérémie Guedj (PLoS Comput. Biol., 2023)

Impact of variants of concern on SARS-CoV-2 viral dynamics in non-human primates. - Aurélien Marc; Romain Marlin; Flora Donati; Mélanie Prague; Marion Kerioui; Cécile Hérate; Marie Alexandre; Nathalie Dereuddre-Bosquet; Julie Bertrand; Vanessa Contreras; Sylvie Behillil; Pauline Maisonnasse; et al. (PLoS Comput. Biol., 2023)

Parameter estimation in nonlinear mixed effect models based on ordinary differential equations: an optimal control approach. - Quentin Clairon; Chloé Pasin; Irene Balelli; Rodolphe Thiébaut; Mélanie Prague (Comput. Stat., 2024)